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TUB3 alpha-tubulin TUB3 [ Saccharomyces cerevisiae S288C ]

Gene ID: 854915, updated on 18-Sep-2024

Summary

Official Symbol
TUB3
Official Full Name
alpha-tubulin TUB3
Primary source
SGD:S000004593
Locus tag
YML124C
See related
AllianceGenome:SGD:S000004593; FungiDB:YML124C; VEuPathDB:YML124C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
A structural constituent of cytoskeleton. Predicted to be involved in several processes, including microtubule cytoskeleton organization; nuclear division; and nuclear migration by microtubule mediated pushing forces. Located in spindle. Part of tubulin complex. Used to study several diseases, including Alzheimer's disease; leukemia; lissencephaly; lung carcinoma; and osteoblastoma. Human ortholog(s) of this gene implicated in several diseases, including Fanconi renotubular syndrome 3; amyotrophic lateral sclerosis type 22; keratoconus; lissencephaly (multiple); and visual epilepsy. Orthologous to several human genes including EHHADH (enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase); TUBA1A (tubulin alpha 1a); and TUBA1B (tubulin alpha 1b). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See TUB3 in Genome Data Viewer
Location:
chromosome: XIII
Exon count:
2
Sequence:
Chromosome: XIII; NC_001145.3 (22048..23683, complement)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene hydroxymethylglutaryl-CoA synthase Neighboring gene cytochrome-b5 reductase Neighboring gene ncRNA Neighboring gene phosphate transporter PHO84 Neighboring gene uncharacterized protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of cytoskeleton IMP
Inferred from Mutant Phenotype
more info
PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 
involved_in homologous chromosome segregation IC
Inferred by Curator
more info
PubMed 
involved_in microtubule cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in microtubule-based process IEA
Inferred from Electronic Annotation
more info
 
involved_in mitotic cell cycle IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitotic sister chromatid segregation IC
Inferred by Curator
more info
PubMed 
involved_in nuclear division IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in nuclear migration along microtubule IC
Inferred by Curator
more info
PubMed 
involved_in nuclear migration by microtubule mediated pushing forces IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
is_active_in microtubule IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in spindle HDA PubMed 
is_active_in spindle IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of tubulin complex IGI
Inferred from Genetic Interaction
more info
PubMed 

General protein information

Preferred Names
alpha-tubulin TUB3
NP_013582.1
  • Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form microtubules; expressed at lower level than Tub1p; TUB3 has a paralog, TUB1, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    22048..23683 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182487.1NP_013582.1  TPA: alpha-tubulin TUB3 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013582.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W0G1, P09734
    UniProtKB/TrEMBL
    A6ZLU1, B3LLD6, C8ZE78, G2WJT3, N1NZC7
    Conserved Domains (1) summary
    cd02186
    Location:2436
    alpha_tubulin; The alpha-tubulin family