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ACP5 acyl carrier protein 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832778, updated on 18-Sep-2024

Summary

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Official Symbol
ACP5
Official Full Name
acyl carrier protein 5
Primary source
TAIR:AT5G27200
Locus tag
AT5G27200
See related
Araport:AT5G27200
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
acyl carrier protein 5; A_TM021B04.6; T21B4.110; T21B4_110
Summary
encodes an acyl carrier protein
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Genomic context

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See ACP5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (9571185..9572213)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene Protein of unknown function, transmembrane-40 Neighboring gene Frigida-like protein Neighboring gene Frigida-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genes of ACYL CARRIER PROTEIN Family Show Different Expression Profiles and Overexpression of ACYL CARRIER PROTEIN 5 Modulates Fatty Acid Composition and Enhances Salt Stress Tolerance in Arabidopsis. Huang J, et al. Front Plant Sci, 2017. PMID 28642782, Free PMC Article
  2. Differential regulation of mRNA levels of acyl carrier protein isoforms in Arabidopsis. Bonaventure G, et al. Plant Physiol, 2002 Jan. PMID 11788768, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables acyl carrier activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables phosphopantetheine binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within fatty acid biosynthetic process TAS
Traceable Author Statement
more info
  
acts_upstream_of_or_within response to salt stress IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
acyl carrier protein 5
NP_198072.1
  • acyl carrier protein 5 (ACP5); FUNCTIONS IN: acyl carrier activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Acyl carrier protein (ACP) (InterPro:IPR003231), Acyl carrier protein-like (InterPro:IPR009081), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: acyl carrier protein 1 (TAIR:AT3G05020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    9571185..9572213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122602.2 → NP_198072.1  acyl carrier protein 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198072.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04652
    UniProtKB/TrEMBL
    A0A178UI15, A0A5S9Y848
    Conserved Domains (1) summary
    TIGR00517
    Location:58 → 133
    acyl_carrier; acyl carrier protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O04652.1

Gene LinkOut

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