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Flywch2 FLYWCH family member 2 [ Mus musculus (house mouse) ]

Gene ID: 76917, updated on 2-Nov-2024

Summary

Official Symbol
Flywch2provided by MGI
Official Full Name
FLYWCH family member 2provided by MGI
Primary source
MGI:MGI:1924167
See related
Ensembl:ENSMUSG00000023911 AllianceGenome:MGI:1924167
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2810417J12Rik; 3010014L17Rik
Summary
Is expressed in brain; male reproductive gland or organ; and spinal cord. Orthologous to human FLYWCH2 (FLYWCH family member 2). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in CNS E18 (RPKM 10.3), whole brain E14.5 (RPKM 10.2) and 23 other tissues See more
Orthologs
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Genomic context

See Flywch2 in Genome Data Viewer
Location:
17 A3.3; 17 12.05 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (23995888..24005190, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (23776914..23786216, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene kringle containing transmembrane protein 2 Neighboring gene RIKEN cDNA 9530082P21 gene Neighboring gene FLYWCH-type zinc finger 1 Neighboring gene STARR-positive B cell enhancer ABC_E4197 Neighboring gene predicted gene, 52285 Neighboring gene serine/arginine repetitive matrix 2 Neighboring gene microRNA 5125

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001357140.1NP_001344069.1  FLYWCH family member 2

    Status: VALIDATED

    Source sequence(s)
    AW124500, BY259710, CF740309
    Consensus CDS
    CCDS28464.1
    UniProtKB/Swiss-Prot
    Q8R3N7, Q9CQE9
    Conserved Domains (1) summary
    pfam15423
    Location:1106
    FLYWCH_N; FLYWCH-type zinc finger-containing protein
  2. NM_029798.4NP_084074.1  FLYWCH family member 2

    See identical proteins and their annotated locations for NP_084074.1

    Status: VALIDATED

    Source sequence(s)
    AC122821, AK013108, AW124500
    Consensus CDS
    CCDS28464.1
    UniProtKB/Swiss-Prot
    Q8R3N7, Q9CQE9
    Related
    ENSMUSP00000024704.4, ENSMUST00000024704.10
    Conserved Domains (1) summary
    pfam15423
    Location:1106
    FLYWCH_N; FLYWCH-type zinc finger-containing protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    23995888..24005190 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001782129.3 RNA Sequence