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LOC763676 vacuolar protein sorting-associated protein 72 homolog [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 763676, updated on 14-Dec-2023

Summary

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Gene symbol
LOC763676
Gene description
vacuolar protein sorting-associated protein 72 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

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See LOC763676 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145612.1 (33421927..33432283)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577266.1 (378308..392917, complement)

NW_022145612.1Genomic Context describing neighboring genes Neighboring gene neogenin-like Neighboring gene lysophosphatidic acid phosphatase type 6-like Neighboring gene ATP-binding cassette sub-family C member 9-like Neighboring gene tubulin monoglycylase TTLL3-like Neighboring gene uncharacterized LOC115930027

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent H2AZ histone chaperone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar protein sorting-associated protein 72 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145612.1 Reference Spur_5.0 Primary Assembly

    Range
    33421927..33432283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030972476.1 → XP_030828336.1  vacuolar protein sorting-associated protein 72 homolog

    UniProtKB/TrEMBL
    A0A7M7MY67
    Conserved Domains (2) summary
    pfam05764
    Location:7 → 231
    YL1; YL1 nuclear protein
    pfam08265
    Location:301 → 329
    YL1_C; YL1 nuclear protein C-terminal domain
Nucleotide Protein
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Molecular Biology Databases
Research Materials