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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001205188.1 → NP_001192117.1 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform 2
See identical proteins and their annotated locations for NP_001192117.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 3' coding region, which results in a frameshift, compared to variant 1. It encodes isoform 2, which has a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC165148, AK010380, BC065100, CT030233
- Consensus CDS
-
CCDS88697.1
- UniProtKB/TrEMBL
- Q3TPC5, Q9CWU3
- Related
- ENSMUSP00000153191.2, ENSMUST00000225380.2
- Conserved Domains (2) summary
-
- sd00039
Location:31 → 79
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:29 → 327
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001360033.1 → NP_001346962.1 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform 3
Status: VALIDATED
- Source sequence(s)
-
AA185461, AC165148, AK161507, BC065100, CT030233
- Conserved Domains (2) summary
-
- COG5170
Location:2 → 283
- CDC55; Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
- sd00039
Location:21 → 57
- 7WD40; WD40 repeat [structural motif]
-
NM_001360034.1 → NP_001346963.1 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC165148, AK161507, BC065100, CT030233
- Conserved Domains (2) summary
-
- COG5170
Location:2 → 283
- CDC55; Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
- sd00039
Location:21 → 57
- 7WD40; WD40 repeat [structural motif]
-
NM_028032.3 → NP_082308.1 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform 1
See identical proteins and their annotated locations for NP_082308.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AC165148, AK161507, BC065100, CT030233
- Consensus CDS
-
CCDS56967.1
- UniProtKB/Swiss-Prot
-
Q6P1F6
- UniProtKB/TrEMBL
- Q3TPC5, Q3TT94
- Related
- ENSMUSP00000086640.6, ENSMUST00000089230.7
- Conserved Domains (2) summary
-
- COG5170
Location:7 → 442
- CDC55; Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
- sd00039
Location:31 → 79
- 7WD40; WD40 repeat [structural motif]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000080.7 Reference GRCm39 C57BL/6J
- Range
-
67251505..67309920 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)