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Ppp2r2a protein phosphatase 2, regulatory subunit B, alpha [ Mus musculus (house mouse) ]

Gene ID: 71978, updated on 2-Nov-2024

Summary

Official Symbol
Ppp2r2aprovided by MGI
Official Full Name
protein phosphatase 2, regulatory subunit B, alphaprovided by MGI
Primary source
MGI:MGI:1919228
See related
Ensembl:ENSMUSG00000022052 AllianceGenome:MGI:1919228
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
mKIAA1541; 2410004D02Rik
Summary
Predicted to enable protein phosphatase 2A binding activity; protein phosphatase regulator activity; and tau protein binding activity. Acts upstream of or within response to morphine. Is active in glutamatergic synapse. Is expressed in eye. Orthologous to human PPP2R2A (protein phosphatase 2 regulatory subunit Balpha). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in adrenal adult (RPKM 26.6), CNS E11.5 (RPKM 11.2) and 27 other tissues See more
Orthologs
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Genomic context

See Ppp2r2a in Genome Data Viewer
Location:
14 D1; 14 34.6 cM
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (67251505..67309920, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (67014056..67072471, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 24258 Neighboring gene BCL2/adenovirus E1B interacting protein 3-like Neighboring gene STARR-positive B cell enhancer mm9_chr14:67627653-67627954 Neighboring gene STARR-seq mESC enhancer starr_37004 Neighboring gene STARR-positive B cell enhancer ABC_E7328 Neighboring gene predicted gene, 52123 Neighboring gene predicted gene, 30438 Neighboring gene STARR-seq mESC enhancer starr_37007

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein phosphatase 2A binding ISO
Inferred from Sequence Orthology
more info
 
enables protein phosphatase regulator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein phosphatase regulator activity IEA
Inferred from Electronic Annotation
more info
 
enables protein phosphatase regulator activity ISO
Inferred from Sequence Orthology
more info
 
enables protein-containing complex binding ISO
Inferred from Sequence Orthology
more info
 
enables tau protein binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in protein dephosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in protein dephosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within response to morphine IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in glutamatergic synapse EXP
Inferred from Experiment
more info
PubMed 
is_active_in glutamatergic synapse IDA
Inferred from Direct Assay
more info
PubMed 
part_of protein phosphatase type 2A complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of protein phosphatase type 2A complex IEA
Inferred from Electronic Annotation
more info
 
part_of protein phosphatase type 2A complex ISO
Inferred from Sequence Orthology
more info
 
is_active_in synapse EXP
Inferred from Experiment
more info
PubMed 
is_active_in synapse IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
NP_001192117.1
NP_001346962.1
NP_001346963.1
NP_082308.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001205188.1NP_001192117.1  serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform 2

    See identical proteins and their annotated locations for NP_001192117.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site in the 3' coding region, which results in a frameshift, compared to variant 1. It encodes isoform 2, which has a shorter and distinct C-terminus, compared to isoform 1.
    Source sequence(s)
    AC165148, AK010380, BC065100, CT030233
    Consensus CDS
    CCDS88697.1
    UniProtKB/TrEMBL
    Q3TPC5, Q9CWU3
    Related
    ENSMUSP00000153191.2, ENSMUST00000225380.2
    Conserved Domains (2) summary
    sd00039
    Location:3179
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:29327
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  2. NM_001360033.1NP_001346962.1  serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform 3

    Status: VALIDATED

    Source sequence(s)
    AA185461, AC165148, AK161507, BC065100, CT030233
    Conserved Domains (2) summary
    COG5170
    Location:2283
    CDC55; Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
    sd00039
    Location:2157
    7WD40; WD40 repeat [structural motif]
  3. NM_001360034.1NP_001346963.1  serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC165148, AK161507, BC065100, CT030233
    Conserved Domains (2) summary
    COG5170
    Location:2283
    CDC55; Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
    sd00039
    Location:2157
    7WD40; WD40 repeat [structural motif]
  4. NM_028032.3NP_082308.1  serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform 1

    See identical proteins and their annotated locations for NP_082308.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (1).
    Source sequence(s)
    AC165148, AK161507, BC065100, CT030233
    Consensus CDS
    CCDS56967.1
    UniProtKB/Swiss-Prot
    Q6P1F6
    UniProtKB/TrEMBL
    Q3TPC5, Q3TT94
    Related
    ENSMUSP00000086640.6, ENSMUST00000089230.7
    Conserved Domains (2) summary
    COG5170
    Location:7442
    CDC55; Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
    sd00039
    Location:3179
    7WD40; WD40 repeat [structural motif]

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    67251505..67309920 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)