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Rgs12 regulator of G-protein signaling 12 [ Mus musculus (house mouse) ]

Gene ID: 71729, updated on 2-Nov-2024

Summary

Official Symbol
Rgs12provided by MGI
Official Full Name
regulator of G-protein signaling 12provided by MGI
Primary source
MGI:MGI:1918979
See related
Ensembl:ENSMUSG00000029101 AllianceGenome:MGI:1918979
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
E130309H11; 1200016K18Rik; 4632412M04Rik
Summary
Predicted to enable G-protein alpha-subunit binding activity and GTPase activator activity. Predicted to be involved in termination of G protein-coupled receptor signaling pathway. Predicted to be located in several cellular components, including apical dendrite; neuronal cell body; and nuclear lumen. Predicted to be part of protein-containing complex. Predicted to be active in cytoplasm; nucleus; and plasma membrane. Predicted to colocalize with synapse. Is expressed in several structures, including heart; nervous system; placenta; trunk; and uterus. Orthologous to human RGS12 (regulator of G protein signaling 12). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in lung adult (RPKM 17.2), ovary adult (RPKM 9.8) and 27 other tissues See more
Orthologs
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Genomic context

See Rgs12 in Genome Data Viewer
Location:
5 B2; 5 17.96 cM
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (35106273..35196988)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (34948929..35039642)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene huntingtin Neighboring gene Myb/SANT-like DNA-binding domain containing 1 Neighboring gene STARR-seq mESC enhancer starr_12848 Neighboring gene STARR-seq mESC enhancer starr_12849 Neighboring gene microRNA 3097 Neighboring gene hepatocyte growth factor activator Neighboring gene docking protein 7

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (4) 
  • Targeted (7)  1 citation

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G-protein alpha-subunit binding ISO
Inferred from Sequence Orthology
more info
 
enables GTPase activator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activator activity ISO
Inferred from Sequence Orthology
more info
 
enables GTPase regulator activity ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in negative regulation of signal transduction IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 
involved_in termination of G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in apical dendrite ISO
Inferred from Sequence Orthology
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in dendrite ISO
Inferred from Sequence Orthology
more info
 
located_in dendrite ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in neuronal cell body ISO
Inferred from Sequence Orthology
more info
 
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
 
located_in synapse ISO
Inferred from Sequence Orthology
more info
 
colocalizes_with synapse ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
regulator of G-protein signaling 12

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001163512.2NP_001156984.1  regulator of G-protein signaling 12 isoform B

    Status: VALIDATED

    Source sequence(s)
    AC126447
    Consensus CDS
    CCDS51472.1
    UniProtKB/TrEMBL
    E9Q1K7, Q9D677
    Related
    ENSMUSP00000109920.2, ENSMUST00000114281.8
    Conserved Domains (7) summary
    smart00455
    Location:377446
    RBD; Raf-like Ras-binding domain
    cd01817
    Location:305377
    RGS12_RBD; Ubiquitin domain of RGS12 and RGS14
    cd08742
    Location:58172
    RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
    smart00390
    Location:530551
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    pfam16611
    Location:448518
    RGS12_us2; Unstructured region between RBD and GoLoco
    pfam16612
    Location:593703
    RGS12_usC; C-terminal unstructured region of RGS12
    pfam16613
    Location:178275
    RGS12_us1; Unstructured region of RGS12
  2. NM_001403471.1NP_001390400.1  regulator of G-protein signaling 12 isoform A

    Status: VALIDATED

    Source sequence(s)
    AC126447, AC133204
    UniProtKB/Swiss-Prot
    E9PXX2, Q8CGE9
  3. NM_001403472.1NP_001390401.1  regulator of G-protein signaling 12 isoform C

    Status: VALIDATED

    Source sequence(s)
    AC126447, AC133204
  4. NM_001403473.1NP_001390402.1  regulator of G-protein signaling 12 isoform D

    Status: VALIDATED

    Source sequence(s)
    AC126447
    UniProtKB/TrEMBL
    D3Z0G6
    Related
    ENSMUSP00000109923.2, ENSMUST00000114284.8
  5. NM_001403474.1NP_001390403.1  regulator of G-protein signaling 12 isoform E

    Status: VALIDATED

    Source sequence(s)
    AC126447
  6. NM_001403475.1NP_001390404.1  regulator of G-protein signaling 12 isoform F

    Status: VALIDATED

    Source sequence(s)
    AC126447
  7. NM_001403476.1NP_001390405.1  regulator of G-protein signaling 12 isoform G

    Status: VALIDATED

    Source sequence(s)
    AC126447
  8. NM_001403477.1NP_001390406.1  regulator of G-protein signaling 12 isoform H

    Status: VALIDATED

    Source sequence(s)
    AC126447
  9. NM_001403478.1NP_001390407.1  regulator of G-protein signaling 12 isoform I

    Status: VALIDATED

    Source sequence(s)
    AC126447
    UniProtKB/TrEMBL
    Q3TTW9
    Related
    ENSMUSP00000109919.2, ENSMUST00000114280.8
  10. NM_173402.3NP_775578.2  regulator of G-protein signaling 12 isoform A

    See identical proteins and their annotated locations for NP_775578.2

    Status: VALIDATED

    Source sequence(s)
    AC126447, AC133204
    Consensus CDS
    CCDS19222.1
    UniProtKB/Swiss-Prot
    E9PXX2, Q8CGE9
    Related
    ENSMUSP00000030984.8, ENSMUST00000030984.14
    Conserved Domains (9) summary
    smart00455
    Location:10351104
    RBD; Raf-like Ras-binding domain
    cd01817
    Location:9631035
    RGS12_RBD; Ubiquitin domain of RGS12 and RGS14
    cd08742
    Location:716830
    RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
    cd00992
    Location:1995
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd13162
    Location:227358
    PTB_RGS12; Regulator of G-protein signaling 12 Phosphotyrosine-binding (PTB) PH-like fold
    pfam02188
    Location:11881209
    GoLoco; GoLoco motif
    pfam16611
    Location:11061176
    RGS12_us2; Unstructured region between RBD and GoLoco
    pfam16612
    Location:12511361
    RGS12_usC; C-terminal unstructured region of RGS12
    pfam16613
    Location:836933
    RGS12_us1; Unstructured region of RGS12

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    35106273..35196988
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006504120.3XP_006504183.1  regulator of G-protein signaling 12 isoform X1

    See identical proteins and their annotated locations for XP_006504183.1

    UniProtKB/TrEMBL
    E9Q652
    Conserved Domains (9) summary
    cd08742
    Location:716830
    RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
    cd00992
    Location:1995
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd13162
    Location:227358
    PTB_RGS12; Regulator of G-protein signaling 12 Phosphotyrosine-binding (PTB) PH-like fold
    cd17136
    Location:9621031
    RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
    pfam02188
    Location:11891209
    GoLoco; GoLoco motif
    pfam16611
    Location:11061180
    RGS12_us2; Unstructured region between RBD and GoLoco
    pfam16612
    Location:12381361
    RGS12_usC; C-terminal unstructured region of RGS12
    pfam16613
    Location:836949
    RGS12_us1; Unstructured region of RGS12
    cl28922
    Location:10321104
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
  2. XM_036165494.1XP_036021387.1  regulator of G-protein signaling 12 isoform X2

    Conserved Domains (9) summary
    cd08742
    Location:716830
    RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
    smart00390
    Location:11881209
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    cd00992
    Location:1995
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd13162
    Location:227358
    PTB_RGS12; Regulator of G-protein signaling 12 Phosphotyrosine-binding (PTB) PH-like fold
    cd17136
    Location:9621031
    RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
    pfam16611
    Location:11061180
    RGS12_us2; Unstructured region between RBD and GoLoco
    pfam16612
    Location:12381378
    RGS12_usC; C-terminal unstructured region of RGS12
    pfam16613
    Location:836949
    RGS12_us1; Unstructured region of RGS12
    cl28922
    Location:10321104
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
  3. XM_006504124.4XP_006504187.1  regulator of G-protein signaling 12 isoform X4

    Conserved Domains (7) summary
    cd08742
    Location:716830
    RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
    cd00992
    Location:1995
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd13162
    Location:227358
    PTB_RGS12; Regulator of G-protein signaling 12 Phosphotyrosine-binding (PTB) PH-like fold
    cd17136
    Location:9621031
    RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
    pfam16611
    Location:11061138
    RGS12_us2; Unstructured region between RBD and GoLoco
    pfam16613
    Location:836949
    RGS12_us1; Unstructured region of RGS12
    cl28922
    Location:10321104
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
  4. XM_006504121.4XP_006504184.1  regulator of G-protein signaling 12 isoform X1

    See identical proteins and their annotated locations for XP_006504184.1

    UniProtKB/TrEMBL
    E9Q652
    Related
    ENSMUSP00000084970.5, ENSMUST00000087684.11
    Conserved Domains (9) summary
    cd08742
    Location:716830
    RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
    cd00992
    Location:1995
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd13162
    Location:227358
    PTB_RGS12; Regulator of G-protein signaling 12 Phosphotyrosine-binding (PTB) PH-like fold
    cd17136
    Location:9621031
    RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
    pfam02188
    Location:11891209
    GoLoco; GoLoco motif
    pfam16611
    Location:11061180
    RGS12_us2; Unstructured region between RBD and GoLoco
    pfam16612
    Location:12381361
    RGS12_usC; C-terminal unstructured region of RGS12
    pfam16613
    Location:836949
    RGS12_us1; Unstructured region of RGS12
    cl28922
    Location:10321104
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
  5. XM_006504122.4XP_006504185.1  regulator of G-protein signaling 12 isoform X1

    See identical proteins and their annotated locations for XP_006504185.1

    UniProtKB/TrEMBL
    E9Q652
    Conserved Domains (9) summary
    cd08742
    Location:716830
    RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
    cd00992
    Location:1995
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd13162
    Location:227358
    PTB_RGS12; Regulator of G-protein signaling 12 Phosphotyrosine-binding (PTB) PH-like fold
    cd17136
    Location:9621031
    RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
    pfam02188
    Location:11891209
    GoLoco; GoLoco motif
    pfam16611
    Location:11061180
    RGS12_us2; Unstructured region between RBD and GoLoco
    pfam16612
    Location:12381361
    RGS12_usC; C-terminal unstructured region of RGS12
    pfam16613
    Location:836949
    RGS12_us1; Unstructured region of RGS12
    cl28922
    Location:10321104
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
  6. XM_006504125.5XP_006504188.1  regulator of G-protein signaling 12 isoform X5

    UniProtKB/TrEMBL
    D3Z0G7
    Conserved Domains (7) summary
    cd08742
    Location:90204
    RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
    cd17136
    Location:336405
    RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
    pfam02188
    Location:563583
    GoLoco; GoLoco motif
    pfam16611
    Location:480554
    RGS12_us2; Unstructured region between RBD and GoLoco
    pfam16612
    Location:612735
    RGS12_usC; C-terminal unstructured region of RGS12
    pfam16613
    Location:210323
    RGS12_us1; Unstructured region of RGS12
    cl28922
    Location:406478
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
  7. XM_030254812.2XP_030110672.1  regulator of G-protein signaling 12 isoform X7

    UniProtKB/TrEMBL
    D3Z0G7
    Conserved Domains (7) summary
    smart00390
    Location:387408
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    cd17136
    Location:161230
    RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
    pfam16611
    Location:305379
    RGS12_us2; Unstructured region between RBD and GoLoco
    pfam16612
    Location:437560
    RGS12_usC; C-terminal unstructured region of RGS12
    pfam16613
    Location:35148
    RGS12_us1; Unstructured region of RGS12
    cl02565
    Location:129
    RGS; Regulator of G protein signaling (RGS) domain superfamily
    cl28922
    Location:231303
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
  8. XM_006504126.5XP_006504189.1  regulator of G-protein signaling 12 isoform X6

    UniProtKB/TrEMBL
    D3Z0G5, D3Z0G7
    Related
    ENSMUSP00000109924.2, ENSMUST00000114285.8
    Conserved Domains (7) summary
    cd08742
    Location:68182
    RGS_RGS12; Regulator of G protein signaling (RGS) domain found in the RGS12 protein
    cd17136
    Location:314383
    RBD1_RGS12; Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12)
    pfam02188
    Location:541561
    GoLoco; GoLoco motif
    pfam16611
    Location:458532
    RGS12_us2; Unstructured region between RBD and GoLoco
    pfam16612
    Location:590713
    RGS12_usC; C-terminal unstructured region of RGS12
    pfam16613
    Location:188301
    RGS12_us1; Unstructured region of RGS12
    cl28922
    Location:384456
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

RNA

  1. XR_003955711.1 RNA Sequence

  2. XR_004942564.1 RNA Sequence

  3. XR_004942565.1 RNA Sequence