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AP5Z1 adaptor related protein complex 5 subunit zeta 1 [ Canis lupus familiaris (dog) ]

Gene ID: 609375, updated on 17-Aug-2024

Summary

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Official Symbol
AP5Z1provided by VGNC
Official Full Name
adaptor related protein complex 5 subunit zeta 1provided by VGNC
Primary source
VGNC:VGNC:37973
See related
Ensembl:ENSCAFG00845014308
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See AP5Z1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
21
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (12984045..12995047, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (14318559..14329556, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (13003941..13014944, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (12794723..12805737, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (12727748..12738752, complement)

Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene monocyte to macrophage differentiation factor 2 Neighboring gene poly(A) polymerase beta Neighboring gene uncharacterized LOC119872164 Neighboring gene uncharacterized LOC106558890 Neighboring gene forkhead box K1 Neighboring gene uncharacterized LOC102153836

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • KIAA0415

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of AP-5 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-5 complex subunit zeta-1
Names
adaptor related protein complex 5 zeta 1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051810.1 Reference ROS_Cfam_1.0

    Range
    12984045..12995047 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038668372.1 → XP_038524300.1  AP-5 complex subunit zeta-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0N7P3, A0A8C0R2N5
    Conserved Domains (1) summary
    pfam14764
    Location:332 → 449
    SPG48; AP-5 complex subunit, vesicle trafficking

  2. XM_038668374.1 → XP_038524302.1  AP-5 complex subunit zeta-1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KY50, A0A8C0N7P3, A0A8C0SXR2, A0A8I3RY14
    Related
    ENSCAFP00845020157.1, ENSCAFT00845025591.1
    Conserved Domains (1) summary
    pfam14764
    Location:321 → 438
    SPG48; AP-5 complex subunit, vesicle trafficking

  3. XM_038668376.1 → XP_038524304.1  AP-5 complex subunit zeta-1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0KY34, A0A8C0N7P3, A0A8C0SY64
    Conserved Domains (1) summary
    pfam14764
    Location:315 → 432
    SPG48; AP-5 complex subunit, vesicle trafficking

  4. XM_038668373.1 → XP_038524301.1  AP-5 complex subunit zeta-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0N7P3
    Conserved Domains (1) summary
    pfam14764
    Location:322 → 439
    SPG48; AP-5 complex subunit, vesicle trafficking

  5. XM_038668375.1 → XP_038524303.1  AP-5 complex subunit zeta-1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0N7P3
    Conserved Domains (1) summary
    pfam14764
    Location:317 → 434
    SPG48; AP-5 complex subunit, vesicle trafficking

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049266.1 Alternate UMICH_Zoey_3.1

    Range
    12794723..12805737 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038478333.1 → XP_038334261.1  AP-5 complex subunit zeta-1 isoform X1

    Conserved Domains (1) summary
    pfam14764
    Location:332 → 449
    SPG48; AP-5 complex subunit, vesicle trafficking

  2. XM_038478335.1 → XP_038334263.1  AP-5 complex subunit zeta-1 isoform X3

    Conserved Domains (1) summary
    pfam14764
    Location:321 → 438
    SPG48; AP-5 complex subunit, vesicle trafficking

  3. XM_038478336.1 → XP_038334264.1  AP-5 complex subunit zeta-1 isoform X5

    Conserved Domains (1) summary
    pfam14764
    Location:315 → 432
    SPG48; AP-5 complex subunit, vesicle trafficking

  4. XM_038478334.1 → XP_038334262.1  AP-5 complex subunit zeta-1 isoform X2

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

    Range
    12727748..12738752 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038603663.1 → XP_038459591.1  AP-5 complex subunit zeta-1 isoform X1

    Conserved Domains (1) summary
    pfam14764
    Location:332 → 449
    SPG48; AP-5 complex subunit, vesicle trafficking

  2. XM_038603665.1 → XP_038459593.1  AP-5 complex subunit zeta-1 isoform X3

    Conserved Domains (1) summary
    pfam14764
    Location:321 → 438
    SPG48; AP-5 complex subunit, vesicle trafficking

  3. XM_038603667.1 → XP_038459595.1  AP-5 complex subunit zeta-1 isoform X5

    Conserved Domains (1) summary
    pfam14764
    Location:315 → 432
    SPG48; AP-5 complex subunit, vesicle trafficking

  4. XM_038603664.1 → XP_038459592.1  AP-5 complex subunit zeta-1 isoform X2

    Conserved Domains (1) summary
    pfam14764
    Location:322 → 439
    SPG48; AP-5 complex subunit, vesicle trafficking

  5. XM_038603666.1 → XP_038459594.1  AP-5 complex subunit zeta-1 isoform X4

    Conserved Domains (1) summary
    pfam14764
    Location:317 → 434
    SPG48; AP-5 complex subunit, vesicle trafficking

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

    Range
    13003941..13014944 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038539580.1 → XP_038395508.1  AP-5 complex subunit zeta-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0N7P3, A0A8C0R2N5
    Conserved Domains (1) summary
    pfam14764
    Location:332 → 449
    SPG48; AP-5 complex subunit, vesicle trafficking

  2. XM_038539582.1 → XP_038395510.1  AP-5 complex subunit zeta-1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KY50, A0A8C0N7P3, A0A8C0SXR2, A0A8I3RY14
    Conserved Domains (1) summary
    pfam14764
    Location:321 → 438
    SPG48; AP-5 complex subunit, vesicle trafficking

  3. XM_038539584.1 → XP_038395512.1  AP-5 complex subunit zeta-1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0KY34, A0A8C0N7P3, A0A8C0SY64
    Conserved Domains (1) summary
    pfam14764
    Location:315 → 432
    SPG48; AP-5 complex subunit, vesicle trafficking

  4. XM_038539581.1 → XP_038395509.1  AP-5 complex subunit zeta-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0N7P3
    Conserved Domains (1) summary
    pfam14764
    Location:322 → 439
    SPG48; AP-5 complex subunit, vesicle trafficking

  5. XM_038539583.1 → XP_038395511.1  AP-5 complex subunit zeta-1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0N7P3
    Conserved Domains (1) summary
    pfam14764
    Location:317 → 434
    SPG48; AP-5 complex subunit, vesicle trafficking

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    14318559..14329556 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014114321.3 → XP_013969796.1  AP-5 complex subunit zeta-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0N7P3, A0A8C0R2N5
    Conserved Domains (1) summary
    pfam14764
    Location:332 → 449
    SPG48; AP-5 complex subunit, vesicle trafficking

  2. XM_846616.6 → XP_851709.2  AP-5 complex subunit zeta-1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KY50, A0A8C0N7P3, A0A8C0SXR2, A0A8I3RY14
    Conserved Domains (1) summary
    pfam14764
    Location:321 → 438
    SPG48; AP-5 complex subunit, vesicle trafficking

  3. XM_038541049.1 → XP_038396977.1  AP-5 complex subunit zeta-1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0N7P3
    Conserved Domains (1) summary
    pfam14764
    Location:315 → 432
    SPG48; AP-5 complex subunit, vesicle trafficking

  4. XM_014114322.3 → XP_013969797.1  AP-5 complex subunit zeta-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0N7P3
    Conserved Domains (1) summary
    pfam14764
    Location:322 → 439
    SPG48; AP-5 complex subunit, vesicle trafficking

  5. XM_014114323.3 → XP_013969798.1  AP-5 complex subunit zeta-1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0N7P3
    Conserved Domains (1) summary
    pfam14764
    Location:317 → 434
    SPG48; AP-5 complex subunit, vesicle trafficking
Nucleotide Protein
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