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GAL3ST3 galactose-3-O-sulfotransferase 3 [ Bos taurus (domestic cattle) ]

Gene ID: 523401, updated on 4-Oct-2024

Summary

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Official Symbol
GAL3ST3provided by VGNC
Official Full Name
galactose-3-O-sulfotransferase 3provided by VGNC
Primary source
VGNC:VGNC:29215
See related
BGD:BT14257; Ensembl:ENSBTAG00000002772
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See GAL3ST3 in Genome Data Viewer
Location:
chromosome: 29
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (44124189..44134866, complement)

Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132344209 Neighboring gene cation channel sperm associated 1 Neighboring gene cystatin E/M Neighboring gene splicing factor 3b subunit 2 Neighboring gene phosphofurin acidic cluster sorting protein 1 Neighboring gene large ribosomal subunit protein uL23-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Clone Names

  • MGC142460

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactose-3-O-sulfotransferase 3
Names
beta-galactose-3-O-sulfotransferase 3
gal-beta-1, 3-GalNAc 3'-sulfotransferase 3
gal3ST-3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075840.1 → NP_001069308.1  galactose-3-O-sulfotransferase 3

    See identical proteins and their annotated locations for NP_001069308.1

    Status: PROVISIONAL

    Source sequence(s)
    BC120166
    UniProtKB/Swiss-Prot
    Q0VCH4
    UniProtKB/TrEMBL
    A0AAA9RTT4
    Related
    ENSBTAP00000003590.3, ENSBTAT00000003590.5
    Conserved Domains (1) summary
    pfam06990
    Location:1 → 398
    Gal-3-0_sulfotr; Galactose-3-O-sulfotransferase

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    44124189..44134866 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005227106.4 → XP_005227163.1  galactose-3-O-sulfotransferase 3 isoform X1

    See identical proteins and their annotated locations for XP_005227163.1

    UniProtKB/Swiss-Prot
    Q0VCH4
    UniProtKB/TrEMBL
    A0AAA9RTT4
    Conserved Domains (1) summary
    pfam06990
    Location:1 → 398
    Gal-3-0_sulfotr; Galactose-3-O-sulfotransferase

  2. XM_010821091.3 → XP_010819393.1  galactose-3-O-sulfotransferase 3 isoform X2

    Conserved Domains (1) summary
    cl22970
    Location:4 → 360
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0VCH4.1 GenPept UniProtKB/Swiss-Prot:Q0VCH4

Gene LinkOut

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Molecular Biology Databases
Research Materials