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ZHX2 zinc fingers and homeoboxes 2 [ Canis lupus familiaris (dog) ]

Gene ID: 482033, updated on 17-Aug-2024

Summary

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Official Symbol
ZHX2provided by VGNC
Official Full Name
zinc fingers and homeoboxes 2provided by VGNC
Primary source
VGNC:VGNC:48632
See related
Ensembl:ENSCAFG00845008690
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See ZHX2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (21568837..21730547)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (21342934..21359598)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (21645278..21807009)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (21297771..21459250)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (21402546..21564353)

Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106559606 Neighboring gene uncharacterized LOC102153186 Neighboring gene uncharacterized LOC102153799 Neighboring gene derlin 1 Neighboring gene TBC1 domain family member 31

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc fingers and homeoboxes protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051817.1 Reference ROS_Cfam_1.0

    Range
    21568837..21730547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038684934.1 → XP_038540862.1  zinc fingers and homeoboxes protein 2

    UniProtKB/TrEMBL
    A0A8C0YWG7, A0A8I3NL05
    Conserved Domains (3) summary
    smart00389
    Location:537 → 582
    HOX; Homeodomain
    cd00086
    Location:444 → 496
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam18387
    Location:106 → 158
    zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain

  2. XM_038684933.1 → XP_038540861.1  zinc fingers and homeoboxes protein 2

    UniProtKB/TrEMBL
    A0A8C0YWG7, A0A8I3NL05
    Related
    ENSCAFP00845011861.1, ENSCAFT00845015275.1
    Conserved Domains (3) summary
    smart00389
    Location:537 → 582
    HOX; Homeodomain
    cd00086
    Location:444 → 496
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam18387
    Location:106 → 158
    zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049273.1 Alternate UMICH_Zoey_3.1

    Range
    21297771..21459250
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038493156.1 → XP_038349084.1  zinc fingers and homeoboxes protein 2

    Conserved Domains (3) summary
    smart00389
    Location:537 → 582
    HOX; Homeodomain
    cd00086
    Location:444 → 496
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam18387
    Location:106 → 158
    zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain

  2. XM_038493155.1 → XP_038349083.1  zinc fingers and homeoboxes protein 2

    Conserved Domains (3) summary
    smart00389
    Location:537 → 582
    HOX; Homeodomain
    cd00086
    Location:444 → 496
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam18387
    Location:106 → 158
    zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

    Range
    21402546..21564353
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038619322.1 → XP_038475250.1  zinc fingers and homeoboxes protein 2

    Conserved Domains (3) summary
    smart00389
    Location:537 → 582
    HOX; Homeodomain
    cd00086
    Location:444 → 496
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam18387
    Location:106 → 158
    zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain

  2. XM_038619321.1 → XP_038475249.1  zinc fingers and homeoboxes protein 2

    Conserved Domains (3) summary
    smart00389
    Location:537 → 582
    HOX; Homeodomain
    cd00086
    Location:444 → 496
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam18387
    Location:106 → 158
    zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

    Range
    21645278..21807009
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038555428.1 → XP_038411356.1  zinc fingers and homeoboxes protein 2

    UniProtKB/TrEMBL
    A0A8C0YWG7, A0A8I3NL05
    Conserved Domains (3) summary
    smart00389
    Location:537 → 582
    HOX; Homeodomain
    cd00086
    Location:444 → 496
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam18387
    Location:106 → 158
    zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain

  2. XM_038555427.1 → XP_038411355.1  zinc fingers and homeoboxes protein 2

    UniProtKB/TrEMBL
    A0A8C0YWG7, A0A8I3NL05
    Conserved Domains (3) summary
    smart00389
    Location:537 → 582
    HOX; Homeodomain
    cd00086
    Location:444 → 496
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam18387
    Location:106 → 158
    zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    21342934..21359598
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038427241.1 → XP_038283169.1  zinc fingers and homeoboxes protein 2

    UniProtKB/TrEMBL
    A0A8C0YWG7, A0A8I3NL05
    Conserved Domains (3) summary
    smart00389
    Location:537 → 582
    HOX; Homeodomain
    cd00086
    Location:444 → 496
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam18387
    Location:106 → 158
    zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain

  2. XM_038427240.1 → XP_038283168.1  zinc fingers and homeoboxes protein 2

    UniProtKB/TrEMBL
    A0A8C0YWG7, A0A8I3NL05
    Conserved Domains (3) summary
    smart00389
    Location:537 → 582
    HOX; Homeodomain
    cd00086
    Location:444 → 496
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam18387
    Location:106 → 158
    zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
Nucleotide Protein
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