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ZBTB5 zinc finger and BTB domain containing 5 [ Gallus gallus (chicken) ]

Gene ID: 431260, updated on 17-Aug-2024

Summary

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Symbol
ZBTB5provided by CGNC
Full Name
zinc finger and BTB domain containing 5provided by CGNC
Primary source
CGNC:3987
See related
Ensembl:ENSGALG00010001178
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ZBTB5 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
3
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (85650137..85664491)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (85650137..85664491)

Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107052429 Neighboring gene solute carrier family 25 member 51 Neighboring gene RNA polymerase I subunit E Neighboring gene uncharacterized LOC124417501 Neighboring gene glyoxylate and hydroxypyruvate reductase Neighboring gene zinc finger CCHC-type containing 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    85650137..85664491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_428814.7 → XP_428814.2  zinc finger and BTB domain-containing protein 5 isoform X1

    See identical proteins and their annotated locations for XP_428814.2

    UniProtKB/TrEMBL
    E1C020
    Related
    ENSGALP00010001270.1, ENSGALT00010002720.1
    Conserved Domains (4) summary
    smart00225
    Location:25 → 119
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:611 → 631
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 119
    BTB; BTB/POZ domain
    pfam13465
    Location:623 → 648
    zf-H2C2_2; Zinc-finger double domain

  2. XM_040655846.2 → XP_040511780.1  zinc finger and BTB domain-containing protein 5 isoform X2

    Conserved Domains (1) summary
    cd18196
    Location:3 → 128
    BTB_POZ_ZBTB5; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 5 (ZBTB5)

  3. XM_004949710.4 → XP_004949767.1  zinc finger and BTB domain-containing protein 5 isoform X1

    See identical proteins and their annotated locations for XP_004949767.1

    UniProtKB/TrEMBL
    E1C020
    Related
    ENSGALP00010001267.1, ENSGALT00010002717.1
    Conserved Domains (4) summary
    smart00225
    Location:25 → 119
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:611 → 631
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 119
    BTB; BTB/POZ domain
    pfam13465
    Location:623 → 648
    zf-H2C2_2; Zinc-finger double domain

  4. XM_040655847.2 → XP_040511781.1  zinc finger and BTB domain-containing protein 5 isoform X2

    Conserved Domains (1) summary
    cd18196
    Location:3 → 128
    BTB_POZ_ZBTB5; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 5 (ZBTB5)

  5. XM_015280798.4 → XP_015136284.1  zinc finger and BTB domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    E1C020
    Related
    ENSGALP00010001272.1, ENSGALT00010002722.1
    Conserved Domains (4) summary
    smart00225
    Location:25 → 119
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:611 → 631
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 119
    BTB; BTB/POZ domain
    pfam13465
    Location:623 → 648
    zf-H2C2_2; Zinc-finger double domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    85650137..85664491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046937269.1 → XP_046793225.1  zinc finger and BTB domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    E1C020

  2. XM_046937272.1 → XP_046793228.1  zinc finger and BTB domain-containing protein 5 isoform X2

  3. XM_046937271.1 → XP_046793227.1  zinc finger and BTB domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    E1C020

  4. XM_046937273.1 → XP_046793229.1  zinc finger and BTB domain-containing protein 5 isoform X2

  5. XM_046937270.1 → XP_046793226.1  zinc finger and BTB domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    E1C020
Nucleotide Protein
Heading Accession and Version

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