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LOC409822 enhancer of split m7 protein [ Apis mellifera (honey bee) ]

Gene ID: 409822, updated on 1-Oct-2024

Summary

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Gene symbol
LOC409822
Gene description
enhancer of split m7 protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB43778
Orthologs
all
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Genomic context

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See LOC409822 in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
2
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG14 NC_037651.1 (2983200..2985288)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG14 NC_007083.3 (2282980..2285099, complement)

Linkage Group LG14 - NC_037651.1Genomic Context describing neighboring genes Neighboring gene tubulin polyglutamylase TTLL4 Neighboring gene enhancer of split mbeta protein Neighboring gene uncharacterized LOC102656505 Neighboring gene uncharacterized LOC100577849 Neighboring gene golgin subfamily A member 6-like protein 22

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  2. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
  3. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anterior/posterior pattern specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of neurogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
enhancer of split m7 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037651.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    2983200..2985288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_393312.7 → XP_393312.1  enhancer of split m7 protein

    See identical proteins and their annotated locations for XP_393312.1

    UniProtKB/TrEMBL
    A0A7M7R5S1, A0A8B9AX34
    Conserved Domains (2) summary
    smart00511
    Location:97 → 137
    ORANGE; Orange domain
    cd19741
    Location:17 → 85
    bHLH-O_ESMB_like; basic helix-loop-helix-orange (bHLH-O) domain found in Drosophila melanogaster enhancer of split mbeta protein (ESMB) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials