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CAV1 caveolin 1 [ Canis lupus familiaris (dog) ]

Gene ID: 403980, updated on 17-Aug-2024

Summary

Official Symbol
CAV1provided by VGNC
Official Full Name
caveolin 1provided by VGNC
Primary source
VGNC:VGNC:38751
See related
Ensembl:ENSCAFG00845006847
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See CAV1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 14 NC_051818.1 (55500946..55536541)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 14 NC_006596.4 (54856462..54888069)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 14 NC_049235.1 (55590528..55622125)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 14 NC_049274.1 (55530973..55562566)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 14 NC_049755.1 (55219411..55251015)

Chromosome 14 - NC_051818.1Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein E-like Neighboring gene caveolin 2 Neighboring gene U4 spliceosomal RNA Neighboring gene MET proto-oncogene, receptor tyrosine kinase Neighboring gene uncharacterized LOC111098848

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in caveola assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in negative regulation of endothelial cell proliferation IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in negative regulation of protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in caveola IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
caveolin-1
Names
vesicular integral-membrane protein VIP21

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001003296.1NP_001003296.1  caveolin-1

    See identical proteins and their annotated locations for NP_001003296.1

    Status: PROVISIONAL

    Source sequence(s)
    U47060
    UniProtKB/Swiss-Prot
    A0M8U8, P33724
    UniProtKB/TrEMBL
    A0A8C0K0N3, A0A8C0MMY6, A0A8I3N6T8
    Related
    ENSCAFP00845009515.1, ENSCAFT00845012174.1
    Conserved Domains (1) summary
    pfam01146
    Location:45175
    Caveolin

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051818.1 Reference ROS_Cfam_1.0

    Range
    55500946..55536541
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038685937.1XP_038541865.1  caveolin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MMY6, A0A8I3N6T8
    Conserved Domains (1) summary
    pfam01146
    Location:14144
    Caveolin
  2. XM_038685936.1XP_038541864.1  caveolin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MMY6, A0A8I3N6T8
    Conserved Domains (1) summary
    pfam01146
    Location:14144
    Caveolin

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049274.1 Alternate UMICH_Zoey_3.1

    Range
    55530973..55562566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049755.1 Alternate UNSW_CanFamBas_1.0

    Range
    55219411..55251015
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049235.1 Alternate UU_Cfam_GSD_1.0

    Range
    55590528..55622125
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006596.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    54856462..54888069
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)