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SSTR2 somatostatin receptor 2 [ Canis lupus familiaris (dog) ]

Gene ID: 403472, updated on 17-Aug-2024

Summary

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Official Symbol
SSTR2provided by VGNC
Official Full Name
somatostatin receptor 2provided by VGNC
Primary source
VGNC:VGNC:46844
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See SSTR2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (7662314..7677653, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (7620598..7621707, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (7876175..7877284, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (7712309..7713418, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (7815153..7816262, complement)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene mitochondrial nucleoid associated protein 1 Neighboring gene VCP nuclear cofactor family member 1 Neighboring gene solute carrier family 39 member 11 Neighboring gene component of oligomeric golgi complex 1 Neighboring gene uncharacterized LOC119876625 Neighboring gene U6 spliceosomal RNA Neighboring gene dnaJ homolog subfamily A member 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Alteration of somatostatin receptor 2 expression in canine mammary gland tumor. Sakai K, et al. J Vet Med Sci, 2015 Oct. PMID 25985817, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables neuropeptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables somatostatin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to estradiol stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to glucocorticoid stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuropeptide signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
somatostatin receptor type 2
Names
SS-2-R
SS2-R
SS2R

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031817.1 → NP_001026987.1  somatostatin receptor type 2

    See identical proteins and their annotated locations for NP_001026987.1

    Status: PROVISIONAL

    Source sequence(s)
    AY702068
    UniProtKB/Swiss-Prot
    Q49LX6
    Conserved Domains (2) summary
    pfam00001
    Location:60 → 312
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:51 → 238
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    7662314..7677653 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038674922.1 → XP_038530850.1  somatostatin receptor type 2 isoform X2

    Conserved Domains (1) summary
    cd15971
    Location:44 → 323
    7tmA_SSTR2; somatostatin receptor type 2, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_038674921.1 → XP_038530849.1  somatostatin receptor type 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0L9X5, A0A8C0S1S1
    Conserved Domains (1) summary
    cd15971
    Location:44 → 323
    7tmA_SSTR2; somatostatin receptor type 2, member of the class A family of seven-transmembrane G protein-coupled receptors

RNA

  1. XR_005431679.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    7712309..7713418 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    7815153..7816262 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    7876175..7877284 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    7620598..7621707 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q49LX6.1 GenPept UniProtKB/Swiss-Prot:Q49LX6

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials