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HTR1B 5-hydroxytryptamine receptor 1B [ Sus scrofa (pig) ]

Gene ID: 397563, updated on 12-Oct-2024

Summary

Official Symbol
HTR1Bprovided by VGNC
Official Full Name
5-hydroxytryptamine receptor 1Bprovided by VGNC
Primary source
VGNC:VGNC:109533
See related
Ensembl:ENSSSCG00000004475
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as
5-HT1B; 5-HT1Db
Orthologs
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Genomic context

See HTR1B in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 1 NC_010443.5 (88597510..88598682)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 1 NC_010443.4 (99465592..99466764)

Chromosome 1 - NC_010443.5Genomic Context describing neighboring genes Neighboring gene meiotic double-stranded break formation protein 4 Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene adenosylhomocysteinase pseudogene Neighboring gene interphotoreceptor matrix proteoglycan 1

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled serotonin receptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating adrenergic receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in bone remodeling IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in regulation of behavior IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in vasoconstriction IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
5-hydroxytryptamine receptor 1B
Names
5-HT-1B
5-hydroxytryptamine 1B receptor
serotonin receptor 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_214298.1NP_999463.1  5-hydroxytryptamine receptor 1B

    See identical proteins and their annotated locations for NP_999463.1

    Status: PROVISIONAL

    Source sequence(s)
    AF188626
    UniProtKB/TrEMBL
    A0A4X1V2K4, A0A5G2QFS0, A0A8D1DWL7, A0A8D1NBV7, Q9GLP5
    Related
    ENSSSCP00000063582.1, ENSSSCT00000004943.4
    Conserved Domains (2) summary
    pfam00001
    Location:67369
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:64186
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010443.5 Reference Sscrofa11.1 Primary Assembly

    Range
    88597510..88598682
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)