tuba1cl.3.L tubulin alpha 1c like, gene 3 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: tuba1cl.3.L
Official Full Name: tubulin alpha 1c like, gene 3 L homeolog
Primary source: Xenbase:XB-GENE-6254951
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: lis3; tuba3; tuba1a; tuba1a-a; tuba1a-b; b-alpha-1; tuba1cl.3; alphatub84; alphatub84b
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Genomic context

Location:: chromosome: 9_10L

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	9_10L	NC_054387.1 (62210133..62212644, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	9_10L	NC_030740.1 (51583882..51651873, complement)

Chromosome 9_10L - NC_054387.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables GTP binding	IEA Inferred from Electronic Annotation more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables structural constituent of cytoskeleton	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within microtubule cytoskeleton organization	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within microtubule-based process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within mitotic cell cycle	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info
located_in microtubule	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: tubulin alpha chain 1c like, L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001086587.1 → NP_001080056.1 tubulin alpha chain 1c like, L homeolog

See identical proteins and their annotated locations for NP_001080056.1

Status: PROVISIONAL

Source sequence(s)

BC106380

UniProtKB/TrEMBL

A0A974BU66, A0A974BUP5, Q7ZYU9

Conserved Domains (1) summary

PTZ00335
Location:1 → 440

PTZ00335; tubulin alpha chain; Provisional

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

62210133..62212644 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041575973.1 → XP_041431907.1 tubulin alpha chain 1c like, L homeolog

UniProtKB/TrEMBL

A0A974BU66, A0A974BUP5, Q7ZYU9

Conserved Domains (1) summary

PTZ00335
Location:1 → 440

PTZ00335; tubulin alpha chain; Provisional