U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Dip2c disco-interacting protein 2 homolog C [ Rattus norvegicus (Norway rat) ]

Gene ID: 307067, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Official Symbol
Dip2cprovided by RGD
Official Full Name
disco-interacting protein 2 homolog Cprovided by RGD
Primary source
RGD:1560155
See related
EnsemblRapid:ENSRNOG00000015288 AllianceGenome:RGD:1560155
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1560155
Summary
Orthologous to human DIP2C (disco interacting protein 2 homolog C). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Heart (RPKM 320.5), Brain (RPKM 144.3) and 9 other tissues See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Dip2c in Genome Data Viewer
Location:
17q12.1
Exon count:
42
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (65338711..65724111, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (60647346..61032467, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (63426688..63810183)

Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134482865 Neighboring gene zinc finger, MYND-type containing 11 Neighboring gene uncharacterized LOC108348621 Neighboring gene acireductone dioxygenase 1, pseudogene 1 Neighboring gene 60S ribosomal protein L22-like Neighboring gene La ribonucleoprotein 4B

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. p38α MAPK proximity assay reveals a regulatory mechanism of alternative splicing in cardiomyocytes. Dumont AA, et al. Biochim Biophys Acta Mol Cell Res, 2019 Dec. PMID 31505169

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Homology

General protein information

Go to the top of the page Help
Preferred Names
disco-interacting protein 2 homolog C
Names
DIP2 disco-interacting protein 2 homolog C

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001107360.2 → NP_001100830.1  disco-interacting protein 2 homolog C isoform 1

    See identical proteins and their annotated locations for NP_001100830.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000017
    UniProtKB/TrEMBL
    A0A8I6G2N3, A6KN16, D3ZZB0
    Related
    ENSRNOP00000106588.1, ENSRNOT00000173173.1
    Conserved Domains (5) summary
    cd05905
    Location:397 → 961
    Dip2; Disco-interacting protein 2 (Dip2)
    COG0318
    Location:373 → 964
    CaiC; Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism]
    pfam00501
    Location:1032 → 1506
    AMP-binding; AMP-binding enzyme
    pfam06464
    Location:7 → 176
    DMAP_binding; DMAP1-binding Domain
    cl17068
    Location:1049 → 1601
    AFD_class_I; Adenylate forming domain, Class I superfamily

  2. NM_001415158.1 → NP_001402087.1  disco-interacting protein 2 homolog C isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000017
    Related
    ENSRNOP00000078375.2, ENSRNOT00000103716.2

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086035.1 Reference GRCr8

    Range
    65338711..65724111 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017600567.3 → XP_017456056.1  disco-interacting protein 2 homolog C isoform X5

    UniProtKB/TrEMBL
    A0A8I6G2N3

  2. XM_017600565.3 → XP_017456054.1  disco-interacting protein 2 homolog C isoform X2

    UniProtKB/TrEMBL
    A0A8I6G2N3

  3. XM_017600566.3 → XP_017456055.1  disco-interacting protein 2 homolog C isoform X3

    UniProtKB/TrEMBL
    A0A8I6G2N3
    Related
    ENSRNOP00000020634.7, ENSRNOT00000020634.8

  4. XM_039095749.2 → XP_038951677.1  disco-interacting protein 2 homolog C isoform X1

    UniProtKB/TrEMBL
    A0A8I6G2N3
    Conserved Domains (2) summary
    cd05905
    Location:1048 → 1622
    Dip2; Disco-interacting protein 2 (Dip2)
    pfam06464
    Location:8 → 174
    DMAP_binding; DMAP1-binding Domain

  5. XM_039095753.2 → XP_038951681.1  disco-interacting protein 2 homolog C isoform X7

    UniProtKB/TrEMBL
    A0A8I6G2N3
    Conserved Domains (1) summary
    cd05905
    Location:885 → 1459
    Dip2; Disco-interacting protein 2 (Dip2)

  6. XM_063276482.1 → XP_063132552.1  disco-interacting protein 2 homolog C isoform X7

  7. XM_063276483.1 → XP_063132553.1  disco-interacting protein 2 homolog C isoform X7

  8. XM_039095750.2 → XP_038951678.1  disco-interacting protein 2 homolog C isoform X4

    UniProtKB/TrEMBL
    A0A8I6G2N3
    Conserved Domains (2) summary
    cd05905
    Location:1033 → 1607
    Dip2; Disco-interacting protein 2 (Dip2)
    pfam06464
    Location:14 → 159
    DMAP_binding; DMAP1-binding Domain

  9. XM_039095751.2 → XP_038951679.1  disco-interacting protein 2 homolog C isoform X6

    UniProtKB/TrEMBL
    A0A8I6G2N3
    Conserved Domains (2) summary
    cd05905
    Location:977 → 1551
    Dip2; Disco-interacting protein 2 (Dip2)
    pfam06464
    Location:14 → 103
    DMAP_binding; DMAP1-binding Domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials
Tools