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Sstr5 somatostatin receptor 5 [ Rattus norvegicus (Norway rat) ]

Gene ID: 25354, updated on 2-Nov-2024

Summary

Official Symbol
Sstr5provided by RGD
Official Full Name
somatostatin receptor 5provided by RGD
Primary source
RGD:3765
See related
EnsemblRapid:ENSRNOG00000018834 AllianceGenome:RGD:3765
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Smstr5; Somato
Summary
Enables somatostatin receptor activity. Involved in adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway and cellular response to glucocorticoid stimulus. Predicted to be active in neuron projection and plasma membrane. Human ortholog(s) of this gene implicated in bipolar disorder. Orthologous to human SSTR5 (somatostatin receptor 5). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See Sstr5 in Genome Data Viewer
Location:
10q12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (15010209..15017469, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (14506868..14512946, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (14847749..14853827, complement)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102547952 Neighboring gene tektin 4 Neighboring gene uncharacterized LOC120095051 Neighboring gene SRY-box transcription factor 8

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables neuropeptide binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables somatostatin receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables somatostatin receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables somatostatin receptor activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in neuron projection IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
somatostatin receptor type 5
Names
SS-5-R
SS5-R
SS5R
Somatostatin receptor subtype 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001430079.1NP_001417008.1  somatostatin receptor type 5

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000010
    UniProtKB/TrEMBL
    A6HD30, G3V8G3
  2. NM_012882.3NP_037014.2  somatostatin receptor type 5

    See identical proteins and their annotated locations for NP_037014.2

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000010
    UniProtKB/Swiss-Prot
    P30938
    UniProtKB/TrEMBL
    A6HD30, G3V8G3
    Related
    ENSRNOP00000025451.1, ENSRNOT00000025451.4
    Conserved Domains (2) summary
    pfam00001
    Location:54303
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:48227
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    15010209..15017469 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063268457.1XP_063124527.1  somatostatin receptor type 5 isoform X1

    Related
    ENSRNOP00000109656.1, ENSRNOT00000133850.1