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Aldoa aldolase, fructose-bisphosphate A [ Rattus norvegicus (Norway rat) ]

Gene ID: 24189, updated on 2-Nov-2024

Summary

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Official Symbol
Aldoaprovided by RGD
Official Full Name
aldolase, fructose-bisphosphate Aprovided by RGD
Primary source
RGD:2089
See related
EnsemblRapid:ENSRNOG00000052802 AllianceGenome:RGD:2089
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Aldo1; RNALDOG5
Summary
Predicted to enable several functions, including fructose binding activity; fructose-bisphosphate aldolase activity; and identical protein binding activity. Involved in several processes, including methylglyoxal biosynthetic process; response to estrogen; and response to lipopolysaccharide. Located in cytoplasm and heterochromatin. Orthologous to human ALDOA (aldolase, fructose-bisphosphate A). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Muscle (RPKM 41307.8), Heart (RPKM 6179.8) and 2 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Aldoa in Genome Data Viewer
Location:
1q36
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (190832820..190838021, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (181402275..181407476, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (198228387..198233988, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene yippee-like 3 Neighboring gene T-box transcription factor 6 Neighboring gene protein phosphatase 4, catalytic subunit Neighboring gene uncharacterized LOC103691235 Neighboring gene U6 spliceosomal RNA Neighboring gene TLC domain containing 3B Neighboring gene uncharacterized LOC134483857

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Differential activation of some transcription factors during rat liver ischemia, reperfusion, and heat shock. Tacchini L, et al. J Cell Physiol, 1999 Aug. PMID 10395295
  2. Changes in endoplasmic reticulum stress proteins and aldolase A in cells exposed to dopamine. Dukes AA, et al. J Neurochem, 2008 Jul. PMID 18384645, Free PMC Article
  3. Aldolase A is present in smooth muscle cell nuclei. Mamczur P, et al. Acta Biochim Pol, 2008. PMID 19081846
  4. LPS increases hepatic HIF-1alpha protein and expression of the HIF-1-dependent gene aldolase A in rats. Scharte M, et al. J Surg Res, 2006 Oct. PMID 16930621
  5. Proteins differentially expressed in response to nicotine in five rat brain regions: identification using a 2-DE/MS-based proteomics approach. Hwang YY, et al. Proteomics, 2006 May. PMID 16622831

See all (60) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Data identified glycolytic enzymes GAPDH and aldolase A as putative interacting proteins for cardiac ATP-sensitive potassium (K(ATP)) channels.
    Title: Cardiac ATP-sensitive K+ channel associates with the glycolytic enzyme complex.
  2. In PC12 cells, DA exposure leads to a cellular response indicative of ER stress prior to the onset of cell death, providing a potential link between DA and the unfolded protein response in the pathogenesis of Parkinson's disease.
    Title: Changes in endoplasmic reticulum stress proteins and aldolase A in cells exposed to dopamine.
  3. Data indicate the presence of a modulated interaction between fructose-1,6-bisphosphatase and aldolase B, and suggest that in kidney, aldolase B specifically participates in gluconeogenesis and with aldolase A in glycolysis.
    Title: Different involvement for aldolase isoenzymes in kidney glucose metabolism: aldolase B but not aldolase A colocalizes and forms a complex with FBPase.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables cytoskeletal protein binding ISO
Inferred from Sequence Orthology
more info
  
enables fructose binding ISO
Inferred from Sequence Orthology
more info
  
enables fructose-bisphosphate aldolase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables fructose-bisphosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
  
enables fructose-bisphosphate aldolase activity ISO
Inferred from Sequence Orthology
more info
  
enables fructose-bisphosphate aldolase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in ATP biosynthetic process ISO
Inferred from Sequence Orthology
more info
  
involved_in binding of sperm to zona pellucida ISO
Inferred from Sequence Orthology
more info
  
involved_in fructose 1,6-bisphosphate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in fructose 1,6-bisphosphate metabolic process ISO
Inferred from Sequence Orthology
more info
  
involved_in fructose metabolic process ISO
Inferred from Sequence Orthology
more info
  
involved_in glycolytic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
  
involved_in glycolytic process ISO
Inferred from Sequence Orthology
more info
  
involved_in glycolytic process ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in methylglyoxal biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in muscle cell cellular homeostasis ISO
Inferred from Sequence Orthology
more info
  
involved_in protein homotetramerization ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in regulation of cell shape ISO
Inferred from Sequence Orthology
more info
  
involved_in response to estrogen IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to hypoxia IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to lipopolysaccharide IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to nicotine IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in striated muscle contraction ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
located_in I band IEA
Inferred from Electronic Annotation
more info
  
located_in M band IEA
Inferred from Electronic Annotation
more info
  
located_in actin cytoskeleton ISO
Inferred from Sequence Orthology
more info
  
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
  
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in extracellular exosome ISO
Inferred from Sequence Orthology
more info
  
located_in heterochromatin IDA
Inferred from Direct Assay
more info
 PubMed 
located_in heterochromatin ISO
Inferred from Sequence Orthology
more info
  
located_in sperm head ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
fructose-bisphosphate aldolase A
Names
aldolase A, fructose-bisphosphate
muscle-type aldolase
NP_001170776.1
NP_001258465.1
NP_036627.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001177305.1 → NP_001170776.1  fructose-bisphosphate aldolase A

    See identical proteins and their annotated locations for NP_001170776.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. All three variants encode the same protein.
    Source sequence(s)
    CO383722, CO398643, M14420
    UniProtKB/Swiss-Prot
    P05065, Q63038
    UniProtKB/TrEMBL
    A0A8L2R123, A6I9E6
    Conserved Domains (1) summary
    pfam00274
    Location:15 → 364
    Glycolytic; Fructose-bisphosphate aldolase class-I

  2. NM_001271536.1 → NP_001258465.1  fructose-bisphosphate aldolase A

    See identical proteins and their annotated locations for NP_001258465.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. All three variants encode the same protein.
    Source sequence(s)
    CB750468, CF975930, FQ228954, FQ229100, JAXUCZ010000001
    UniProtKB/Swiss-Prot
    P05065, Q63038
    UniProtKB/TrEMBL
    A0A8L2R123, A6I9E6
    Related
    ENSRNOP00000069540.3, ENSRNOT00000088473.3
    Conserved Domains (1) summary
    pfam00274
    Location:15 → 364
    Glycolytic; Fructose-bisphosphate aldolase class-I

  3. NM_012495.2 → NP_036627.1  fructose-bisphosphate aldolase A

    See identical proteins and their annotated locations for NP_036627.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript. All three variants encode the same protein.
    Source sequence(s)
    BC064440, CO383722, JAXUCZ010000001
    UniProtKB/Swiss-Prot
    P05065, Q63038
    UniProtKB/TrEMBL
    A0A8L2R123, A6I9E6
    Related
    ENSRNOP00000093578.2, ENSRNOT00000112001.2
    Conserved Domains (1) summary
    pfam00274
    Location:15 → 364
    Glycolytic; Fructose-bisphosphate aldolase class-I

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    190832820..190838021 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P05065.2 GenPept UniProtKB/Swiss-Prot:P05065

Gene LinkOut

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