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Plaur plasminogen activator, urokinase receptor [ Mus musculus (house mouse) ]

Gene ID: 18793, updated on 11-Nov-2024

Summary

Official Symbol
Plaurprovided by MGI
Official Full Name
plasminogen activator, urokinase receptorprovided by MGI
Primary source
MGI:MGI:97612
See related
Ensembl:ENSMUSG00000046223 AllianceGenome:MGI:97612
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Cd87; uPAR; u-PAR
Summary
Predicted to enable enzyme binding activity; protein domain specific binding activity; and signaling receptor binding activity. Predicted to be involved in several processes, including negative regulation of apoptotic signaling pathway; positive regulation of epidermal growth factor receptor signaling pathway; and positive regulation of release of cytochrome c from mitochondria. Located in plasma membrane. Part of serine-type endopeptidase complex. Is expressed in several structures, including decidua; early conceptus; and spleen. Human ortholog(s) of this gene implicated in rheumatoid arthritis. Orthologous to human PLAUR (plasminogen activator, urokinase receptor). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in lung adult (RPKM 24.3), spleen adult (RPKM 16.2) and 16 other tissues See more
Orthologs
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Genomic context

See Plaur in Genome Data Viewer
Location:
7 A3; 7 10.92 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (24161857..24175393)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (24460937..24475970)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_18260 Neighboring gene predicted gene, 36159 Neighboring gene predicted gene, 57507 Neighboring gene STARR-seq mESC enhancer starr_18263 Neighboring gene predicted gene, 53353 Neighboring gene cell adhesion molecule 4 Neighboring gene zinc finger protein 428

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (6) 
  • Targeted (2)  1 citation

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables enzyme binding IEA
Inferred from Electronic Annotation
more info
 
enables enzyme binding ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein domain specific binding IEA
Inferred from Electronic Annotation
more info
 
enables protein domain specific binding ISO
Inferred from Sequence Orthology
more info
 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 
enables signaling receptor binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in epithelial cell differentiation involved in prostate gland development ISO
Inferred from Sequence Orthology
more info
 
involved_in mesenchymal cell differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of intrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of intrinsic apoptotic signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of DNA binding ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of epidermal growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of epidermal growth factor receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of homotypic cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of homotypic cell-cell adhesion ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of protein phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of release of cytochrome c from mitochondria IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of release of cytochrome c from mitochondria ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of cell adhesion ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of fibrinolysis NAS
Non-traceable Author Statement
more info
PubMed 
involved_in regulation of plasminogen activation NAS
Non-traceable Author Statement
more info
PubMed 
involved_in urokinase plasminogen activator signaling pathway NAS
Non-traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
located_in cell surface ISO
Inferred from Sequence Orthology
more info
 
located_in external side of plasma membrane NAS
Non-traceable Author Statement
more info
PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
part_of protein complex involved in cell-matrix adhesion ISO
Inferred from Sequence Orthology
more info
 
part_of serine-type endopeptidase complex IPI
Inferred from Physical Interaction
more info
PubMed 
part_of serine-type endopeptidase complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
urokinase plasminogen activator surface receptor
Names
urokinase plasminogen activator receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011113.4NP_035243.1  urokinase plasminogen activator surface receptor precursor

    See identical proteins and their annotated locations for NP_035243.1

    Status: VALIDATED

    Source sequence(s)
    AC161166, AK002580, AK131951
    Consensus CDS
    CCDS20950.1
    UniProtKB/Swiss-Prot
    P35456, P35457
    UniProtKB/TrEMBL
    Q3U2D1, Q545X5
    Related
    ENSMUSP00000002284.10, ENSMUST00000002284.11
    Conserved Domains (2) summary
    smart00134
    Location:213300
    LU; Ly-6 antigen / uPA receptor -like domain
    pfam00021
    Location:26100
    UPAR_LY6; u-PAR/Ly-6 domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    24161857..24175393
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036152789.1XP_036008682.1  urokinase plasminogen activator surface receptor isoform X1

    UniProtKB/TrEMBL
    Q3U2D1
    Conserved Domains (1) summary
    smart00134
    Location:24106
    LU; Ly-6 antigen / uPA receptor -like domain

RNA

  1. XR_004934042.1 RNA Sequence