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Cd244a CD244 molecule A [ Mus musculus (house mouse) ]

Gene ID: 18106, updated on 14-Nov-2024

Summary

Official Symbol
Cd244aprovided by MGI
Official Full Name
CD244 molecule Aprovided by MGI
Primary source
MGI:MGI:109294
See related
Ensembl:ENSMUSG00000004709 AllianceGenome:MGI:109294
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2B4; C9.1; Ly90; NAIL; Nmrk; Cd244; NKR2B4; SLAMF4; F730046O15Rik
Summary
Predicted to enable MHC class I protein binding activity. Involved in myeloid dendritic cell activation; natural killer cell activation involved in immune response; and positive regulation of lymphocyte proliferation. Located in external side of plasma membrane. Is expressed in thymus primordium. Human ortholog(s) of this gene implicated in rheumatoid arthritis. Orthologous to human CD244 (CD244 molecule). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in spleen adult (RPKM 1.6), large intestine adult (RPKM 0.7) and 12 other tissues See more
Orthologs
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Genomic context

See Cd244a in Genome Data Viewer
Location:
1 H3; 1 79.52 cM
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (171386761..171412884)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (171558718..171585316)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene intelectin 1 (galactofuranose binding) Neighboring gene predicted gene, 37450 Neighboring gene STARR-positive B cell enhancer ABC_E9497 Neighboring gene STARR-seq mESC enhancer starr_03041 Neighboring gene predicted gene, 35200 Neighboring gene lymphocyte antigen 9 Neighboring gene STARR-positive B cell enhancer ABC_E5848 Neighboring gene SLAM family member 7 Neighboring gene microRNA 7683

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables MHC class I protein binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables MHC class I protein binding ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in external side of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in external side of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in external side of plasma membrane ISO
Inferred from Sequence Orthology
more info
PubMed 
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
natural killer cell receptor 2B4
Names
CD244 natural killer cell receptor 2B4
NK cell receptor 2B4
NK cell type I receptor protein 2B4
SLAM family member 4
non-MHC restricted killing associated
signaling lymphocytic activation molecule 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001423738.1NP_001410667.1  natural killer cell receptor 2B4 isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC083892
  2. NM_018729.2NP_061199.2  natural killer cell receptor 2B4 isoform 1 precursor

    See identical proteins and their annotated locations for NP_061199.2

    Status: VALIDATED

    Source sequence(s)
    AC083892, AF082803, AK137505, BY207581
    Consensus CDS
    CCDS35778.1
    UniProtKB/Swiss-Prot
    O88654, Q07763, Q3UV86, Q9JIE0
    UniProtKB/TrEMBL
    Q3S4B1
    Related
    ENSMUSP00000004829.8, ENSMUST00000004829.13
    Conserved Domains (1) summary
    pfam11465
    Location:22129
    Receptor_2B4; Natural killer cell receptor 2B4

RNA

  1. NR_187115.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC083892
  2. NR_187116.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC083892

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    171386761..171412884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)