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Msmb beta-microseminoprotein [ Mus musculus (house mouse) ]

Gene ID: 17695, updated on 2-Nov-2024

Summary

Official Symbol
Msmbprovided by MGI
Official Full Name
beta-microseminoproteinprovided by MGI
Primary source
MGI:MGI:97166
See related
Ensembl:ENSMUSG00000021907 AllianceGenome:MGI:97166
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PIP; PSP94; beta-MSP
Summary
Predicted to be located in extracellular region. Is expressed in male reproductive gland or organ. Used to study prostate cancer. Orthologous to human MSMB (microseminoprotein beta). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Msmb in Genome Data Viewer
Location:
14 B; 14 19.4 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (31863980..31880284)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (32142023..32158327)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_36333 Neighboring gene diphthamine biosynthesis 3 Neighboring gene oxidoreductase NAD-binding domain containing 1 Neighboring gene STARR-seq mESC enhancer starr_36334 Neighboring gene STARR-seq mESC enhancer starr_36335 Neighboring gene predicted gene, 57612 Neighboring gene STARR-seq mESC enhancer starr_36337 Neighboring gene STARR-seq mESC enhancer starr_36339 Neighboring gene predicted gene, 41127 Neighboring gene eukaryotic translation initiation factor 5 pseudogene Neighboring gene nuclear receptor coactivator 4 Neighboring gene translocase of inner mitochondrial membrane 23 Neighboring gene predicted gene, 23946

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Gene trapped (2) 
  • Targeted (3)  1 citation

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
beta-microseminoprotein
Names
PSP-94
beta-inhibin
prostate secreted seminal plasma protein
prostate secretory protein of 94 amino acids
prostatic inhibin protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_020597.3NP_065622.1  beta-microseminoprotein precursor

    See identical proteins and their annotated locations for NP_065622.1

    Status: VALIDATED

    Source sequence(s)
    AC154532
    Consensus CDS
    CCDS36862.1
    UniProtKB/Swiss-Prot
    O08540
    Related
    ENSMUSP00000022464.7, ENSMUST00000022464.14
    Conserved Domains (1) summary
    pfam05825
    Location:21113
    PSP94; Beta-microseminoprotein (PSP-94)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    31863980..31880284
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017315907.2XP_017171396.1  beta-microseminoprotein isoform X1

    Conserved Domains (1) summary
    pfam05825
    Location:96188
    PSP94; Beta-microseminoprotein (PSP-94)