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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001033713.2 → NP_001028885.1 myocyte-specific enhancer factor 2A isoform a
See identical proteins and their annotated locations for NP_001028885.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the canonical isoform (a). Variants 1 and 7 both encode the same isoform (a).
- Source sequence(s)
-
AC120123, AC158751, AI849762, AK052385, AK132678, AK136368, BC061128
- Consensus CDS
-
CCDS39981.1
- UniProtKB/Swiss-Prot
- Q3V155, Q4VA09, Q60929, Q6P8Q3
- Related
- ENSMUSP00000117496.2, ENSMUST00000156690.8
- Conserved Domains (2) summary
-
- COG5068
Location:1 → 235
- ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
- cd00265
Location:2 → 78
- MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
-
NM_001291191.2 → NP_001278120.1 myocyte-specific enhancer factor 2A isoform b
See identical proteins and their annotated locations for NP_001278120.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks two alternate in-frame exons and contains another alternate in-frame exon compared to variant 1. The resulting isoform (b) has the same N- and C-termini but is shorter compared to isoform a. Variants 2 and 3 both encode the same isoform (b).
- Source sequence(s)
-
AC120123, AC158751, AI849762
- Consensus CDS
-
CCDS71979.1
- UniProtKB/Swiss-Prot
-
Q60929
- Related
- ENSMUSP00000032776.9, ENSMUST00000032776.15
- Conserved Domains (3) summary
-
- cd00265
Location:2 → 78
- MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
- pfam11597
Location:129 → 238
- Med13_N; Mediator complex subunit 13 N-terminal
- pfam12347
Location:98 → 152
- HJURP_C; Holliday junction regulator protein family C-terminal repeat
-
NM_001291192.1 → NP_001278121.1 myocyte-specific enhancer factor 2A isoform b
See identical proteins and their annotated locations for NP_001278121.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks two alternate in-frame exons, and contains another alternate in-frame exon compared to variant 1. The resulting isoform (b) has the same N- and C-termini but is shorter compared to isoform a. Variants 2 and 3 both encode the same isoform (b).
- Source sequence(s)
-
AC158751, AI849762, AK132678, AK136368, AK153751
- Consensus CDS
-
CCDS71979.1
- UniProtKB/Swiss-Prot
-
Q60929
- Related
- ENSMUSP00000075664.6, ENSMUST00000076325.12
- Conserved Domains (3) summary
-
- cd00265
Location:2 → 78
- MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
- pfam11597
Location:129 → 238
- Med13_N; Mediator complex subunit 13 N-terminal
- pfam12347
Location:98 → 152
- HJURP_C; Holliday junction regulator protein family C-terminal repeat
-
NM_001291195.1 → NP_001278124.1 myocyte-specific enhancer factor 2A isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (c) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
AC158751, AI849762, AK052385, AK132678, AK136368
- Consensus CDS
-
CCDS71980.1
- UniProtKB/Swiss-Prot
-
Q60929
- Related
- ENSMUSP00000103100.2, ENSMUST00000107476.8
- Conserved Domains (2) summary
-
- COG5068
Location:1 → 235
- ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
- cd00265
Location:2 → 78
- MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
-
NM_001291196.1 → NP_001278125.1 myocyte-specific enhancer factor 2A isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) contains an alternate exon, lacks an alternate in-frame exon, and initiates translation at an alternate start codon compared to variant 1. The resulting isoform (d) is shorter at the N-terminus and lacks an internal segment compared to variant 1.
- Source sequence(s)
-
AC158751, AI849762, AK052385, AK132678, AK136368
- UniProtKB/Swiss-Prot
-
Q60929
-
NM_001357324.1 → NP_001344253.1 myocyte-specific enhancer factor 2A isoform e
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) lacks an alternate in-frame exon and contains another alternate in-frame exon compared to variant 1. The resulting isoform (e) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
AC120123, AC158751, AI849762
- Conserved Domains (2) summary
-
- cd00265
Location:2 → 78
- MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
- pfam12347
Location:97 → 151
- HJURP_C; Holliday junction regulator protein family C-terminal repeat
-
NM_001357325.1 → NP_001344254.1 myocyte-specific enhancer factor 2A isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR, compared to variant 1, and encodes isoform a. Variants 1 and 7 both encode the same isoform (a).
- Source sequence(s)
-
AC120123, AC158751, AI849762
- Consensus CDS
-
CCDS39981.1
- UniProtKB/Swiss-Prot
- Q3V155, Q4VA09, Q60929, Q6P8Q3
- Conserved Domains (2) summary
-
- COG5068
Location:1 → 235
- ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
- cd00265
Location:2 → 78
- MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000073.7 Reference GRCm39 C57BL/6J
- Range
-
66880911..67026435 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036152740.1 → XP_036008633.1 myocyte-specific enhancer factor 2A isoform X5
-
XM_036152735.1 → XP_036008628.1 myocyte-specific enhancer factor 2A isoform X2
- UniProtKB/Swiss-Prot
- Q3V155, Q4VA09, Q60929, Q6P8Q3
- Conserved Domains (2) summary
-
- COG5068
Location:1 → 235
- ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
- cd00265
Location:2 → 78
- MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
-
XM_030242191.2 → XP_030098051.1 myocyte-specific enhancer factor 2A isoform X3
- Conserved Domains (2) summary
-
- COG5068
Location:1 → 235
- ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
- cd00265
Location:2 → 78
- MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
-
XM_036152738.1 → XP_036008631.1 myocyte-specific enhancer factor 2A isoform X3
- Conserved Domains (2) summary
-
- COG5068
Location:1 → 235
- ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
- cd00265
Location:2 → 78
- MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
-
XM_036152736.1 → XP_036008629.1 myocyte-specific enhancer factor 2A isoform X2
- UniProtKB/Swiss-Prot
- Q3V155, Q4VA09, Q60929, Q6P8Q3
- Related
- ENSMUSP00000138566.2, ENSMUST00000135493.8
- Conserved Domains (2) summary
-
- COG5068
Location:1 → 235
- ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
- cd00265
Location:2 → 78
- MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
-
XM_036152739.1 → XP_036008632.1 myocyte-specific enhancer factor 2A isoform X4
-
XM_036152734.1 → XP_036008627.1 myocyte-specific enhancer factor 2A isoform X1
- Conserved Domains (2) summary
-
- cd00265
Location:2 → 78
- MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
- pfam12347
Location:97 → 151
- HJURP_C; Holliday junction regulator protein family C-terminal repeat
-
XM_006540684.5 → XP_006540747.1 myocyte-specific enhancer factor 2A isoform X1
See identical proteins and their annotated locations for XP_006540747.1
- Conserved Domains (2) summary
-
- cd00265
Location:2 → 78
- MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
- pfam12347
Location:97 → 151
- HJURP_C; Holliday junction regulator protein family C-terminal repeat
-
XM_036152737.1 → XP_036008630.1 myocyte-specific enhancer factor 2A isoform X1
- Conserved Domains (2) summary
-
- cd00265
Location:2 → 78
- MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
- pfam12347
Location:97 → 151
- HJURP_C; Holliday junction regulator protein family C-terminal repeat