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Mc2r melanocortin 2 receptor [ Mus musculus (house mouse) ]

Gene ID: 17200, updated on 2-Nov-2024

Summary

Official Symbol
Mc2rprovided by MGI
Official Full Name
melanocortin 2 receptorprovided by MGI
Primary source
MGI:MGI:96928
See related
Ensembl:ENSMUSG00000045569 AllianceGenome:MGI:96928
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ACTHR; MC2-R; ACTH-R
Summary
Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and regulation of metabolic process. Predicted to be active in cytoplasm and plasma membrane. Is expressed in several structures, including adrenal gland; brain; hemolymphoid system gland; lung; and reproductive system. Human ortholog(s) of this gene implicated in West syndrome and glucocorticoid deficiency 1. Orthologous to human MC2R (melanocortin 2 receptor). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in adrenal adult (RPKM 74.8) and subcutaneous fat pad adult (RPKM 7.1) See more
Orthologs
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Genomic context

See Mc2r in Genome Data Viewer
Location:
18 E2; 18 41.89 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (68539970..68562391, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (68406899..68429320, complement)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 54023 Neighboring gene predicted gene, 54024 Neighboring gene STARR-seq mESC enhancer starr_44928 Neighboring gene STARR-seq mESC enhancer starr_44929 Neighboring gene predicted gene, 29677 Neighboring gene STARR-seq mESC enhancer starr_44930 Neighboring gene predicted gene, 41765 Neighboring gene STARR-seq mESC enhancer starr_44932 Neighboring gene predicted gene, 30700 Neighboring gene predicted gene, 30641

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (4) 
  • Targeted (2)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables corticotropin receptor activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
adrenocorticotropic hormone receptor
Names
ACTH receptor
adrenocorticotropin receptor
melanocortin receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001271716.1NP_001258645.1  adrenocorticotropic hormone receptor

    See identical proteins and their annotated locations for NP_001258645.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) lacks an internal exon in the 5' UTR, compared to variant 4. Variants 1, 2, 3 and 4 encode the same protein.
    Source sequence(s)
    AK033100, D85688, D85689
    Consensus CDS
    CCDS29328.1
    UniProtKB/Swiss-Prot
    Q64326
    UniProtKB/TrEMBL
    Q544P9
    Conserved Domains (2) summary
    pfam00001
    Location:41276
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:35291
    7tm_4; Olfactory receptor
  2. NM_001271717.1NP_001258646.1  adrenocorticotropic hormone receptor

    See identical proteins and their annotated locations for NP_001258646.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 4. Variants 1, 2, 3 and 4 encode the same protein.
    Source sequence(s)
    AC021063
    Consensus CDS
    CCDS29328.1
    UniProtKB/Swiss-Prot
    Q64326
    UniProtKB/TrEMBL
    Q544P9
    Conserved Domains (2) summary
    pfam00001
    Location:41276
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:35291
    7tm_4; Olfactory receptor
  3. NM_001301372.1NP_001288301.1  adrenocorticotropic hormone receptor

    See identical proteins and their annotated locations for NP_001288301.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) represents the longest transcript and encodes a 296aa protein. Variants 1, 2, 3 and 4 encode the same protein.
    Source sequence(s)
    AC021063
    Consensus CDS
    CCDS29328.1
    UniProtKB/Swiss-Prot
    Q64326
    UniProtKB/TrEMBL
    Q544P9
    Conserved Domains (2) summary
    pfam00001
    Location:41276
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:35291
    7tm_4; Olfactory receptor
  4. NM_008560.3NP_032586.1  adrenocorticotropic hormone receptor

    See identical proteins and their annotated locations for NP_032586.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks two internal exons in the 5' UTR, compared to variant 4. Variants 1, 2, 3 and 4 encode the same protein.
    Source sequence(s)
    AK033100, D85688, D85689
    Consensus CDS
    CCDS29328.1
    UniProtKB/Swiss-Prot
    Q64326
    UniProtKB/TrEMBL
    Q544P9
    Related
    ENSMUSP00000058691.7, ENSMUST00000052347.8
    Conserved Domains (2) summary
    pfam00001
    Location:41276
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:35291
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    68539970..68562391 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)