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VNG_RS12485 helix-turn-helix domain-containing protein [ Halobacterium salinarum NRC-1 ]

Gene ID: 1446837, updated on 17-Jun-2024

Summary

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Gene symbol
VNG_RS12485
Gene description
helix-turn-helix domain-containing protein
Locus tag
VNG_RS12485
Gene type
protein coding
Organism
Halobacterium salinarum NRC-1 (strain: NRC-1; ATCC 700922, culture-collection: ATCC:700922)
Lineage
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
Old locus tag
VNG7053
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Genomic context

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Location:
plasmid: pNRC100
Sequence:
NC_001869.1 (53918..54322)

NC_001869.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene sulfite exporter TauE/SafE family protein Neighboring gene thioredoxin Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001869.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of Halobacterium species NRC-1. Ng WV, et al. Proc Natl Acad Sci U S A, 2000 Oct 24. PMID 11016950, Free PMC Article
  2. Genetics of a novel starch utilisation pathway present in Klebsiella oxytoca. Fiedler G, et al. J Mol Biol, 1996 Feb 23. PMID 8594196
  3. TrmB, a sugar-specific transcriptional regulator of the trehalose/maltose ABC transporter from the hyperthermophilic archaeon Thermococcus litoralis. Lee SJ, et al. J Biol Chem, 2003 Jan 10. PMID 12426307
  4. An Lrp-like protein of the hyperthermophilic archaeon Sulfolobus solfataricus which binds to its own promoter. Napoli A, et al. J Bacteriol, 1999 Mar. PMID 10049378, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
helix-turn-helix domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001869.1 Reference assembly

    Range
    53918..54322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010890426.1 MULTISPECIES: helix-turn-helix domain-containing protein [Halobacterium]

    See identical proteins and their annotated locations for WP_010890426.1

    UniProtKB/TrEMBL
    B0R8P8, O54663
    Conserved Domains (1) summary
    COG3355
    Location:1 → 126
    COG3355; Predicted transcriptional regulator [Transcription]
Nucleotide Protein
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Gene LinkOut

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