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LOC102452888 tubby-related protein 3-like [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102452888, updated on 9-Nov-2023

Summary

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Gene symbol
LOC102452888
Gene description
tubby-related protein 3-like
See related
Ensembl:ENSPSIG00000015259
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
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Genomic context

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See LOC102452888 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005854197.1 (2535369..2537723, complement)

NW_005854197.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112545230 Neighboring gene SCAN domain-containing protein 3-like Neighboring gene diaphanous related formin 2 Neighboring gene uncharacterized LOC106731744

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005854197 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubby-related protein 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005854197.1 Reference PelSin_1.0 Primary Assembly

    Range
    2535369..2537723 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025182906.1 → XP_025038691.1  tubby-related protein 3-like isoform X1

    Conserved Domains (1) summary
    pfam01167
    Location:87 → 162
    Tub; Tub family

  2. XM_006119695.3 → XP_006119757.1  tubby-related protein 3-like isoform X2

    UniProtKB/TrEMBL
    K7GA23
    Related
    ENSPSIP00000017134.1, ENSPSIT00000017212.1
    Conserved Domains (1) summary
    pfam01167
    Location:83 → 158
    Tub; Tub family
Nucleotide Protein
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