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Mafb MAF bZIP transcription factor B [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101955894, updated on 8-Mar-2024

Summary

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Gene symbol
Mafb
Gene description
MAF bZIP transcription factor B
Locus tag
H1C71_018260
See related
EnsemblRapid:ENSSTOG00015016251
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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See Mafb in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024408640.1 (177738940..177742271, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936561.1 (1007273..1010548)

NW_024408640.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U3 Neighboring gene 60S ribosomal protein L5-like Neighboring gene transfer RNA valine (anticodon CAC) Neighboring gene DNA topoisomerase I

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of myeloid cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor MafB

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024408640.1 Reference HiC_Itri_2 Primary Assembly

    Range
    177738940..177742271 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005329834.4 → XP_005329891.1  transcription factor MafB

    UniProtKB/TrEMBL
    I3N660
    Related
    ENSSTOP00015019973.1, ENSSTOT00015021849.1
    Conserved Domains (2) summary
    cd14718
    Location:233 → 302
    bZIP_Maf_large; Basic leucine zipper (bZIP) domain of large musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain
    pfam08383
    Location:81 → 113
    Maf_N; Maf N-terminal region
Nucleotide Protein
Heading Accession and Version

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