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LOC101693490 TSC22 domain family protein 4 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101693490, updated on 20-Nov-2023

Summary

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Gene symbol
LOC101693490
Gene description
TSC22 domain family protein 4
See related
Ensembl:ENSMPUG00000015678
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Also known as
TSC22D4; CUNH7orf61
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Genomic context

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See LOC101693490 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421293.1 (8259505..8275485)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569223.1 (274608..285151, complement)

NW_025421293.1Genomic Context describing neighboring genes Neighboring gene ArfGAP with FG repeats 2 Neighboring gene neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1 Neighboring gene uncharacterized LOC106006721 Neighboring gene protein phosphatase 1 regulatory subunit 35 Neighboring gene methylphosphate capping enzyme

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to osmotic stress IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TSC22 domain family protein 4; uncharacterized protein C7orf61 homolog
Names
TSC22 domain family member 4
chromosome unknown C7orf61 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421293.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    8259505..8275485
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045075045.1 → XP_044930980.1  TSC22 domain family protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A8U0RU45
    Conserved Domains (1) summary
    PHA03247
    Location:14 → 282
    PHA03247; large tegument protein UL36; Provisional

  2. XM_004761506.2 → XP_004761563.2  TSC22 domain family protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A8U0SZ13, G9KVG6
    Conserved Domains (2) summary
    PHA03247
    Location:22 → 231
    PHA03247; large tegument protein UL36; Provisional
    cl01853
    Location:337 → 375
    YabA; Regulator of replication initiation timing [Replication, recombination and repair]

  3. XM_004761507.3 → XP_004761564.1  uncharacterized protein C7orf61 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8U0MZJ5, G9L4D8
    Conserved Domains (1) summary
    pfam15775
    Location:19 → 203
    DUF4703; Domain of unknown function (DUF4703)
Nucleotide Protein
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