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PROX1 prospero homeobox 1 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101692251, updated on 8-Mar-2024

Summary

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Gene symbol
PROX1
Gene description
prospero homeobox 1
See related
Ensembl:ENSMPUG00000013456
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See PROX1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422132.1 (281224..333731)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569431.1 (1134520..1187016)

NW_025422132.1Genomic Context describing neighboring genes Neighboring gene tigger transposable element-derived protein 1-like Neighboring gene translation initiation factor IF-2-like Neighboring gene SET and MYND domain containing 2 Neighboring gene protein tyrosine phosphatase non-receptor type 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prospero homeobox protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422132.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    281224..333731
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045071901.1 → XP_044927836.1  prospero homeobox protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8U0RPD6
    Conserved Domains (1) summary
    pfam05044
    Location:579 → 731
    HPD; Homeo-prospero domain

  2. XM_045071902.1 → XP_044927837.1  prospero homeobox protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8U0RPD6
    Conserved Domains (1) summary
    pfam05044
    Location:579 → 731
    HPD; Homeo-prospero domain

  3. XM_013049221.2 → XP_012904675.1  prospero homeobox protein 1 isoform X2

    See identical proteins and their annotated locations for XP_012904675.1

    UniProtKB/TrEMBL
    M3YPU6
    Conserved Domains (1) summary
    pfam05044
    Location:579 → 730
    HPD; Homeo-prospero domain

  4. XM_045071903.1 → XP_044927838.1  prospero homeobox protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8U0RPD6
    Conserved Domains (1) summary
    pfam05044
    Location:579 → 731
    HPD; Homeo-prospero domain

  5. XM_045071904.1 → XP_044927839.1  prospero homeobox protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8U0RPD6
    Conserved Domains (1) summary
    pfam05044
    Location:579 → 731
    HPD; Homeo-prospero domain
Nucleotide Protein
Heading Accession and Version

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