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ZFX zinc finger protein X-linked [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101690148, updated on 8-Mar-2024

Summary

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Gene symbol
ZFX
Gene description
zinc finger protein X-linked
See related
Ensembl:ENSMPUG00000000105
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See ZFX in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421989.1 (19449416..19505405)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569286.1 (2609963..2666118, complement)

NW_025421989.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene transcription factor SPT20 homolog Neighboring gene transcription factor SPT20 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger X-chromosomal protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421989.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    19449416..19505405
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004769158.3 → XP_004769215.1  zinc finger X-chromosomal protein isoform X1

    See identical proteins and their annotated locations for XP_004769215.1

    UniProtKB/TrEMBL
    M3XM01
    Conserved Domains (6) summary
    COG5048
    Location:538 → 675
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:485 → 505
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:714 → 736
    zf-C2H2; Zinc finger, C2H2 type
    pfam04704
    Location:71 → 405
    Zfx_Zfy_act; Zfx / Zfy transcription activation region
    pfam13465
    Location:728 → 752
    zf-H2C2_2; Zinc-finger double domain
    cl19880
    Location:372 → 452
    ROS_MUCR; ROS/MUCR transcriptional regulator protein

  2. XM_045089418.1 → XP_044945353.1  zinc finger X-chromosomal protein isoform X3

    UniProtKB/TrEMBL
    A0A8U0SMB5
    Conserved Domains (6) summary
    COG5048
    Location:491 → 628
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:438 → 458
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:667 → 689
    zf-C2H2; Zinc finger, C2H2 type
    pfam04704
    Location:71 → 352
    Zfx_Zfy_act; Zfx / Zfy transcription activation region
    pfam13465
    Location:681 → 705
    zf-H2C2_2; Zinc-finger double domain
    cl19880
    Location:375 → 405
    ROS_MUCR; ROS/MUCR transcriptional regulator protein

  3. XM_045089419.1 → XP_044945354.1  zinc finger X-chromosomal protein isoform X4

    UniProtKB/TrEMBL
    A0A8U0VB58
    Conserved Domains (6) summary
    COG5048
    Location:490 → 627
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:437 → 457
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:666 → 688
    zf-C2H2; Zinc finger, C2H2 type
    pfam04704
    Location:71 → 357
    Zfx_Zfy_act; Zfx / Zfy transcription activation region
    pfam13465
    Location:680 → 704
    zf-H2C2_2; Zinc-finger double domain
    cl19880
    Location:324 → 404
    ROS_MUCR; ROS/MUCR transcriptional regulator protein

  4. XM_045089416.1 → XP_044945351.1  zinc finger X-chromosomal protein isoform X1

    UniProtKB/TrEMBL
    M3XM01
    Conserved Domains (6) summary
    COG5048
    Location:538 → 675
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:485 → 505
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:714 → 736
    zf-C2H2; Zinc finger, C2H2 type
    pfam04704
    Location:71 → 405
    Zfx_Zfy_act; Zfx / Zfy transcription activation region
    pfam13465
    Location:728 → 752
    zf-H2C2_2; Zinc-finger double domain
    cl19880
    Location:372 → 452
    ROS_MUCR; ROS/MUCR transcriptional regulator protein

  5. XM_045089415.1 → XP_044945350.1  zinc finger X-chromosomal protein isoform X1

    UniProtKB/TrEMBL
    M3XM01
    Conserved Domains (6) summary
    COG5048
    Location:538 → 675
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:485 → 505
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:714 → 736
    zf-C2H2; Zinc finger, C2H2 type
    pfam04704
    Location:71 → 405
    Zfx_Zfy_act; Zfx / Zfy transcription activation region
    pfam13465
    Location:728 → 752
    zf-H2C2_2; Zinc-finger double domain
    cl19880
    Location:372 → 452
    ROS_MUCR; ROS/MUCR transcriptional regulator protein

  6. XM_045089417.1 → XP_044945352.1  zinc finger X-chromosomal protein isoform X1

    UniProtKB/TrEMBL
    M3XM01
    Conserved Domains (6) summary
    COG5048
    Location:538 → 675
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:485 → 505
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:714 → 736
    zf-C2H2; Zinc finger, C2H2 type
    pfam04704
    Location:71 → 405
    Zfx_Zfy_act; Zfx / Zfy transcription activation region
    pfam13465
    Location:728 → 752
    zf-H2C2_2; Zinc-finger double domain
    cl19880
    Location:372 → 452
    ROS_MUCR; ROS/MUCR transcriptional regulator protein

  7. XM_045089414.1 → XP_044945349.1  zinc finger X-chromosomal protein isoform X1

    UniProtKB/TrEMBL
    M3XM01
    Conserved Domains (6) summary
    COG5048
    Location:538 → 675
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:485 → 505
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:714 → 736
    zf-C2H2; Zinc finger, C2H2 type
    pfam04704
    Location:71 → 405
    Zfx_Zfy_act; Zfx / Zfy transcription activation region
    pfam13465
    Location:728 → 752
    zf-H2C2_2; Zinc-finger double domain
    cl19880
    Location:372 → 452
    ROS_MUCR; ROS/MUCR transcriptional regulator protein

  8. XM_004769157.3 → XP_004769214.1  zinc finger X-chromosomal protein isoform X1

    See identical proteins and their annotated locations for XP_004769214.1

    UniProtKB/TrEMBL
    M3XM01
    Conserved Domains (6) summary
    COG5048
    Location:538 → 675
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:485 → 505
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:714 → 736
    zf-C2H2; Zinc finger, C2H2 type
    pfam04704
    Location:71 → 405
    Zfx_Zfy_act; Zfx / Zfy transcription activation region
    pfam13465
    Location:728 → 752
    zf-H2C2_2; Zinc-finger double domain
    cl19880
    Location:372 → 452
    ROS_MUCR; ROS/MUCR transcriptional regulator protein

  9. XM_004769159.3 → XP_004769216.1  zinc finger X-chromosomal protein isoform X2

    UniProtKB/TrEMBL
    A0A8U0T2C8
    Conserved Domains (6) summary
    COG5048
    Location:512 → 649
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:459 → 479
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:688 → 710
    zf-C2H2; Zinc finger, C2H2 type
    pfam04704
    Location:45 → 379
    Zfx_Zfy_act; Zfx / Zfy transcription activation region
    pfam13465
    Location:702 → 726
    zf-H2C2_2; Zinc-finger double domain
    cl19880
    Location:346 → 426
    ROS_MUCR; ROS/MUCR transcriptional regulator protein
Nucleotide Protein
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