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ATXN7L3 ataxin 7 like 3 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101683050, updated on 8-Mar-2024

Summary

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Gene symbol
ATXN7L3
Gene description
ataxin 7 like 3
See related
Ensembl:ENSMPUG00000009478
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See ATXN7L3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421399.1 (2569013..2577104, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569316.1 (2291993..2299206)

NW_025421399.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SOCS box containing 16 Neighboring gene transmembrane and ubiquitin like domain containing 2 Neighboring gene upstream binding transcription factor Neighboring gene basic salivary proline-rich protein 3-like Neighboring gene solute carrier family 4 member 1 (Diego blood group)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of DUBm complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of SAGA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ataxin-7-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421399.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    2569013..2577104 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045080769.1 → XP_044936704.1  ataxin-7-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8U0NA57
    Conserved Domains (2) summary
    pfam08209
    Location:80 → 112
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:234 → 263
    SCA7; zinc-binding domain

  2. XM_045080770.1 → XP_044936705.1  ataxin-7-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8U0V1X1
    Conserved Domains (2) summary
    pfam08209
    Location:80 → 112
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:227 → 256
    SCA7; zinc-binding domain

  3. XM_045080771.1 → XP_044936706.1  ataxin-7-like protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A8U0S7A1
    Conserved Domains (2) summary
    pfam08209
    Location:80 → 112
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:215 → 244
    SCA7; zinc-binding domain

  4. XM_045080772.1 → XP_044936707.1  ataxin-7-like protein 3 isoform X4

    UniProtKB/TrEMBL
    M3YDJ5
    Conserved Domains (2) summary
    pfam08209
    Location:80 → 112
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:208 → 237
    SCA7; zinc-binding domain

  5. XM_004772555.3 → XP_004772612.1  ataxin-7-like protein 3 isoform X1

    See identical proteins and their annotated locations for XP_004772612.1

    UniProtKB/TrEMBL
    A0A8U0NA57
    Conserved Domains (2) summary
    pfam08209
    Location:80 → 112
    Sgf11; Sgf11 (transcriptional regulation protein)
    pfam08313
    Location:234 → 263
    SCA7; zinc-binding domain
Nucleotide Protein
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