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PAX1 paired box 1 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101682104, updated on 8-Mar-2024

Summary

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Gene symbol
PAX1
Gene description
paired box 1
See related
Ensembl:ENSMPUG00000001187
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See PAX1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421329.1 (8557791..8568408)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569184.1 (3341626..3352423, complement)

NW_025421329.1Genomic Context describing neighboring genes Neighboring gene NK2 homeobox 4 Neighboring gene NK2 homeobox 2 Neighboring gene uncharacterized LOC101681910 Neighboring gene uncharacterized LOC101681710 Neighboring gene transfer RNA serine (anticodon GCU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
paired box protein Pax-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421329.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    8557791..8568408
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004754119.3 → XP_004754176.1  paired box protein Pax-1

    UniProtKB/TrEMBL
    M3XQ26
    Related
    ENSMPUP00000001176.1
    Conserved Domains (1) summary
    cd00131
    Location:93 → 220
    PAX; Paired Box domain
Nucleotide Protein
Heading Accession and Version

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