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TGIF2 TGFB induced factor homeobox 2 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101138486, updated on 1-Oct-2024

Summary

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Gene symbol
TGIF2
Gene description
TGFB induced factor homeobox 2
See related
Ensembl:ENSGGOG00000011784
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See TGIF2 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 21 NC_073245.2 (48787082..48807558)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 20 NC_073244.1 (47576578..47597877)

Chromosome 21 - NC_073245.2Genomic Context describing neighboring genes Neighboring gene DLG associated protein 4 Neighboring gene uncharacterized LOC115931716 Neighboring gene myosin light chain 9 Neighboring gene RAB5 interacting factor Neighboring gene Src like adaptor 2 Neighboring gene NDRG family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein TGIF2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073245.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    48787082..48807558
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004062102.5 → XP_004062150.1  homeobox protein TGIF2

    See identical proteins and their annotated locations for XP_004062150.1

    UniProtKB/TrEMBL
    G3R7Z0
    Conserved Domains (1) summary
    pfam05920
    Location:36 → 75
    Homeobox_KN; Homeobox KN domain

  2. XM_004062100.5 → XP_004062148.1  homeobox protein TGIF2

    See identical proteins and their annotated locations for XP_004062148.1

    UniProtKB/TrEMBL
    G3R7Z0
    Conserved Domains (1) summary
    pfam05920
    Location:36 → 75
    Homeobox_KN; Homeobox KN domain

  3. XM_004062103.5 → XP_004062151.1  homeobox protein TGIF2

    See identical proteins and their annotated locations for XP_004062151.1

    UniProtKB/TrEMBL
    G3R7Z0
    Conserved Domains (1) summary
    pfam05920
    Location:36 → 75
    Homeobox_KN; Homeobox KN domain

  4. XM_004062104.5 → XP_004062152.1  homeobox protein TGIF2

    See identical proteins and their annotated locations for XP_004062152.1

    UniProtKB/TrEMBL
    G3R7Z0
    Conserved Domains (1) summary
    pfam05920
    Location:36 → 75
    Homeobox_KN; Homeobox KN domain

  5. XM_055373461.2 → XP_055229436.1  homeobox protein TGIF2

    UniProtKB/TrEMBL
    G3R7Z0

  6. XM_004062101.5 → XP_004062149.1  homeobox protein TGIF2

    See identical proteins and their annotated locations for XP_004062149.1

    UniProtKB/TrEMBL
    G3R7Z0
    Conserved Domains (1) summary
    pfam05920
    Location:36 → 75
    Homeobox_KN; Homeobox KN domain

  7. XM_019016958.4 → XP_018872503.1  homeobox protein TGIF2

    UniProtKB/TrEMBL
    G3R7Z0
    Related
    ENSGGOP00000011490.2
    Conserved Domains (1) summary
    pfam05920
    Location:36 → 75
    Homeobox_KN; Homeobox KN domain
Nucleotide Protein
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