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ZFP62 ZFP62 zinc finger protein [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101054491, updated on 8-Mar-2024

Summary

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Gene symbol
ZFP62
Gene description
ZFP62 zinc finger protein
See related
EnsemblRapid:ENSSBOG00000027767
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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See ZFP62 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100940.1 (487403..502663)

NW_024100940.1Genomic Context describing neighboring genes Neighboring gene butyrophilin like 3 Neighboring gene 40S ribosomal protein S29-like Neighboring gene butyrophilin like 8 Neighboring gene uncharacterized LOC120360353 Neighboring gene alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100940 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 62 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100940.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    487403..502663
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010332745.1 → XP_010331047.1  zinc finger protein 62 homolog isoform X4

    Conserved Domains (2) summary
    COG5048
    Location:414 → 827
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:194 → 214
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_039460687.1 → XP_039316621.1  zinc finger protein 62 homolog isoform X4

    Conserved Domains (2) summary
    COG5048
    Location:414 → 827
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:194 → 214
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_010332743.2 → XP_010331045.1  zinc finger protein 62 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2K6TSA1
    Related
    ENSSBOP00000022453.1, ENSSBOT00000039303.2
    Conserved Domains (3) summary
    COG5048
    Location:451 → 864
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:231 → 251
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:272 → 296
    zf-H2C2_2; Zinc-finger double domain

  4. XM_039460686.1 → XP_039316620.1  zinc finger protein 62 homolog isoform X4

    Conserved Domains (2) summary
    COG5048
    Location:414 → 827
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:194 → 214
    ZF_C2H2; C2H2 Zn finger [structural motif]

  5. XM_010332744.2 → XP_010331046.1  zinc finger protein 62 homolog isoform X3

    Conserved Domains (3) summary
    COG5048
    Location:353 → 782
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:233 → 253
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:274 → 298
    zf-H2C2_2; Zinc-finger double domain

  6. XM_010332742.1 → XP_010331044.1  zinc finger protein 62 homolog isoform X1

    Conserved Domains (3) summary
    COG5048
    Location:453 → 866
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:233 → 253
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:274 → 298
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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