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BATF basic leucine zipper ATF-like transcription factor [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101050184, updated on 8-Mar-2024

Summary

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Gene symbol
BATF
Gene description
basic leucine zipper ATF-like transcription factor
See related
EnsemblRapid:ENSSBOG00000034354
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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See BATF in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100921.1 (80731265..80755844)

NW_024100921.1Genomic Context describing neighboring genes Neighboring gene Fos proto-oncogene, AP-1 transcription factor subunit Neighboring gene small Cajal body-specific RNA 1 Neighboring gene Jun dimerization protein 2 Neighboring gene 60S ribosomal protein L21-like Neighboring gene FLVCR choline and putative heme transporter 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100921 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
basic leucine zipper transcriptional factor ATF-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100921.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    80731265..80755844
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003924575.3 → XP_003924624.1  basic leucine zipper transcriptional factor ATF-like

    See identical proteins and their annotated locations for XP_003924624.1

    UniProtKB/TrEMBL
    A0A2K6UX05
    Related
    ENSSBOP00000036439.1, ENSSBOT00000053371.2
    Conserved Domains (1) summary
    cd14701
    Location:26 → 83
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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