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TLX3 T cell leukemia homeobox 3 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101046973, updated on 8-Mar-2024

Summary

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Gene symbol
TLX3
Gene description
T cell leukemia homeobox 3
See related
EnsemblRapid:ENSSBOG00000034367
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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See TLX3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100940.1 (9185274..9188167, complement)

NW_024100940.1Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor 18 Neighboring gene nucleophosmin 1 Neighboring gene uncharacterized LOC104652672 Neighboring gene RAN binding protein 17 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100940 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in animal organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-cell leukemia homeobox protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100940.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    9185274..9188167 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003936158.3 → XP_003936207.1  T-cell leukemia homeobox protein 3

    UniProtKB/TrEMBL
    A0A2K6UX35
    Related
    ENSSBOP00000036457.1, ENSSBOT00000053389.2
    Conserved Domains (1) summary
    pfam00046
    Location:169 → 223
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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