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ZNF416 zinc finger protein 416 [ Papio anubis (olive baboon) ]

Gene ID: 101023971, updated on 8-Mar-2024

Summary

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Gene symbol
ZNF416
Gene description
zinc finger protein 416
See related
Ensembl:ENSPANG00000003201
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human all
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Genomic context

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See ZNF416 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
5
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 20 NC_044995.1 (12045019..12052320, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 19 NC_018170.2 (50403653..50411025, complement)

Chromosome 20 - NC_044995.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 549 Neighboring gene zinc finger protein 550 Neighboring gene zinc finger protein interacting with K protein 1 Neighboring gene zinc finger protein 530 Neighboring gene zinc finger protein 134

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 416

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044995.1 Reference Panubis1.0 Primary Assembly

    Range
    12045019..12052320 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003916217.4 → XP_003916266.1  zinc finger protein 416 isoform X1

    UniProtKB/TrEMBL
    A0A0A0MVZ8
    Related
    ENSPANP00000008239.1, ENSPANT00000012758.4
    Conserved Domains (6) summary
    smart00349
    Location:28 → 70
    KRAB; krueppel associated box
    COG5048
    Location:269 → 420
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:272 → 292
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:270 → 292
    zf-C2H2; Zinc finger, C2H2 type
    pfam01352
    Location:28 → 67
    KRAB; KRAB box
    pfam13465
    Location:284 → 309
    zf-H2C2_2; Zinc-finger double domain

  2. XM_021931494.2 → XP_021787186.1  zinc finger protein 416 isoform X3

    Conserved Domains (3) summary
    COG5048
    Location:197 → 348
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:418 → 501
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:200 → 220
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_009195462.4 → XP_009193726.1  zinc finger protein 416 isoform X2

    Conserved Domains (3) summary
    COG5048
    Location:218 → 369
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:439 → 522
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:221 → 241
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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