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ZSCAN20 zinc finger and SCAN domain containing 20 [ Papio anubis (olive baboon) ]

Gene ID: 101021301, updated on 8-Mar-2024

Summary

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Gene symbol
ZSCAN20
Gene description
zinc finger and SCAN domain containing 20
See related
Ensembl:ENSPANG00000005573
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See ZSCAN20 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 1 NC_044976.1 (31650035..31678904)
103 previous assembly Panu_3.0 (GCF_000264685.3) 1 NC_018152.2 (31785326..31814516)

Chromosome 1 - NC_044976.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110743393 Neighboring gene alpha 1,3-galactosyltransferase 2 Neighboring gene polyhomeotic homolog 2 Neighboring gene proteasome subunit alpha type-3 pseudogene Neighboring gene CUB and Sushi multiple domains 2 Neighboring gene high mobility group box 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
zinc finger and SCAN domain-containing protein 20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044976.1 Reference Panubis1.0 Primary Assembly

    Range
    31650035..31678904
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009204409.4 → XP_009202673.1  zinc finger and SCAN domain-containing protein 20 isoform X1

    See identical proteins and their annotated locations for XP_009202673.1

    UniProtKB/TrEMBL
    A0A096MUB0
    Conserved Domains (7) summary
    smart00349
    Location:226 → 275
    KRAB; krueppel associated box
    COG5048
    Location:699 → 1033
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:740 → 760
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:738 → 760
    zf-C2H2; Zinc finger, C2H2 type
    pfam02023
    Location:47 → 132
    SCAN; SCAN domain
    pfam13465
    Location:752 → 776
    zf-H2C2_2; Zinc-finger double domain
    pfam13837
    Location:483 → 564
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

  2. XM_009204420.4 → XP_009202684.1  zinc finger and SCAN domain-containing protein 20 isoform X2

    Conserved Domains (7) summary
    smart00349
    Location:226 → 275
    KRAB; krueppel associated box
    COG5048
    Location:698 → 1032
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:739 → 759
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:737 → 759
    zf-C2H2; Zinc finger, C2H2 type
    pfam02023
    Location:47 → 132
    SCAN; SCAN domain
    pfam13465
    Location:751 → 775
    zf-H2C2_2; Zinc-finger double domain
    pfam13837
    Location:482 → 563
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

  3. XM_009204426.4 → XP_009202690.1  zinc finger and SCAN domain-containing protein 20 isoform X3

    UniProtKB/TrEMBL
    A0A2I3MIP6
    Related
    ENSPANP00000035667.1, ENSPANT00000053973.2
    Conserved Domains (6) summary
    COG5048
    Location:645 → 979
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:686 → 706
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:684 → 706
    zf-C2H2; Zinc finger, C2H2 type
    pfam02023
    Location:47 → 132
    SCAN; SCAN domain
    pfam13465
    Location:698 → 722
    zf-H2C2_2; Zinc-finger double domain
    pfam13837
    Location:429 → 510
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

  4. XM_003891545.5 → XP_003891594.1  zinc finger and SCAN domain-containing protein 20 isoform X1

    See identical proteins and their annotated locations for XP_003891594.1

    UniProtKB/TrEMBL
    A0A096MUB0
    Related
    ENSPANP00000003411.1, ENSPANT00000014448.3
    Conserved Domains (7) summary
    smart00349
    Location:226 → 275
    KRAB; krueppel associated box
    COG5048
    Location:699 → 1033
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:740 → 760
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:738 → 760
    zf-C2H2; Zinc finger, C2H2 type
    pfam02023
    Location:47 → 132
    SCAN; SCAN domain
    pfam13465
    Location:752 → 776
    zf-H2C2_2; Zinc-finger double domain
    pfam13837
    Location:483 → 564
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
Nucleotide Protein
Heading Accession and Version

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