U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NHLH1 nescient helix-loop-helix 1 [ Papio anubis (olive baboon) ]

Gene ID: 101017661, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
NHLH1
Gene description
nescient helix-loop-helix 1
See related
Ensembl:ENSPANG00000011970
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See NHLH1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 1 NC_044976.1 (130817192..130823074)
103 previous assembly Panu_3.0 (GCF_000264685.3) 1 NC_018152.2 (130825118..130831051)

Chromosome 1 - NC_044976.1Genomic Context describing neighboring genes Neighboring gene peroxisomal biogenesis factor 19 Neighboring gene COPI coat complex subunit alpha Neighboring gene nicastrin Neighboring gene U4 spliceosomal RNA Neighboring gene VANGL planar cell polarity protein 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
helix-loop-helix protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044976.1 Reference Panubis1.0 Primary Assembly

    Range
    130817192..130823074
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003892922.5 → XP_003892971.1  helix-loop-helix protein 1

    See identical proteins and their annotated locations for XP_003892971.1

    UniProtKB/TrEMBL
    A0A096MXA7
    Related
    ENSPANP00000004518.1, ENSPANT00000011200.3
    Conserved Domains (1) summary
    cd19701
    Location:61 → 132
    bHLH_TS_HEN1; basic helix-loop-helix (bHLH) domain found in helix-loop-helix protein 1 (HEN-1) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.