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STAT4 signal transducer and activator of transcription 4 [ Papio anubis (olive baboon) ]

Gene ID: 101007479, updated on 11-Apr-2024

Summary

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Gene symbol
STAT4
Gene description
signal transducer and activator of transcription 4
See related
Ensembl:ENSPANG00000022795
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See STAT4 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
26
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 10 NC_044985.1 (74765090..74888457, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 12 NC_018163.2 (76682173..76805762, complement)

Chromosome 10 - NC_044985.1Genomic Context describing neighboring genes Neighboring gene glutaminase kidney isoform, mitochondrial-like Neighboring gene ras-related protein Rab-1A-like Neighboring gene signal transducer and activator of transcription 1 Neighboring gene uncharacterized LOC110740981 Neighboring gene U6 spliceosomal RNA Neighboring gene high mobility group protein B1 pseudogene Neighboring gene uncharacterized LOC103876393 Neighboring gene uncharacterized LOC103876392

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway via JAK-STAT IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to peptide hormone IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
signal transducer and activator of transcription 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044985.1 Reference Panubis1.0 Primary Assembly

    Range
    74765090..74888457 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003907744.3 → XP_003907793.1  signal transducer and activator of transcription 4 isoform X1

    See identical proteins and their annotated locations for XP_003907793.1

    UniProtKB/TrEMBL
    A0A096N8T7
    Conserved Domains (4) summary
    cd10375
    Location:553 → 700
    SH2_STAT4; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 4proteins
    smart00964
    Location:2 → 121
    STAT_int; STAT protein, protein interaction domain
    cd16854
    Location:140 → 312
    STAT4_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 4 (STAT4)
    cd16848
    Location:316 → 473
    STAT4_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription 4 (STAT4)

  2. XM_021924382.2 → XP_021780074.1  signal transducer and activator of transcription 4 isoform X1

    UniProtKB/TrEMBL
    A0A096N8T7
    Related
    ENSPANP00000009018.1, ENSPANT00000026578.3
    Conserved Domains (4) summary
    cd10375
    Location:553 → 700
    SH2_STAT4; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 4proteins
    smart00964
    Location:2 → 121
    STAT_int; STAT protein, protein interaction domain
    cd16854
    Location:140 → 312
    STAT4_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 4 (STAT4)
    cd16848
    Location:316 → 473
    STAT4_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription 4 (STAT4)

  3. XM_021924384.1 → XP_021780076.1  signal transducer and activator of transcription 4 isoform X2

    Conserved Domains (4) summary
    cd10375
    Location:538 → 685
    SH2_STAT4; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 4proteins
    smart00964
    Location:2 → 121
    STAT_int; STAT protein, protein interaction domain
    pfam01017
    Location:140 → 314
    STAT_alpha; STAT protein, all-alpha domain
    pfam02864
    Location:316 → 547
    STAT_bind; STAT protein, DNA binding domain

  4. XM_021924383.1 → XP_021780075.1  signal transducer and activator of transcription 4 isoform X1

    UniProtKB/TrEMBL
    A0A096N8T7
    Conserved Domains (4) summary
    cd10375
    Location:553 → 700
    SH2_STAT4; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 4proteins
    smart00964
    Location:2 → 121
    STAT_int; STAT protein, protein interaction domain
    cd16854
    Location:140 → 312
    STAT4_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 4 (STAT4)
    cd16848
    Location:316 → 473
    STAT4_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription 4 (STAT4)

  5. XM_009182643.4 → XP_009180907.1  signal transducer and activator of transcription 4 isoform X1

    See identical proteins and their annotated locations for XP_009180907.1

    UniProtKB/TrEMBL
    A0A096N8T7
    Conserved Domains (4) summary
    cd10375
    Location:553 → 700
    SH2_STAT4; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 4proteins
    smart00964
    Location:2 → 121
    STAT_int; STAT protein, protein interaction domain
    cd16854
    Location:140 → 312
    STAT4_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 4 (STAT4)
    cd16848
    Location:316 → 473
    STAT4_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription 4 (STAT4)
Nucleotide Protein
Heading Accession and Version

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