U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ETV5 ETS variant transcription factor 5 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100990078, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ETV5
Gene description
ETS variant transcription factor 5
See related
Ensembl:ENSPPAG00000028036
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ETV5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 2 NC_085926.1 (183917053..183980350, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 3 NC_073252.1 (183921772..183985060, complement)

Chromosome 2 - NC_085926.1Genomic Context describing neighboring genes Neighboring gene nmrA-like family domain-containing protein 1 Neighboring gene transformer 2 beta homolog Neighboring gene diacylglycerol kinase gamma Neighboring gene uncharacterized LOC134729915 Neighboring gene uncharacterized LOC130541410

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ETS translocation variant 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_085926.1 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    183917053..183980350 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003806618.5 → XP_003806666.1  ETS translocation variant 5

    See identical proteins and their annotated locations for XP_003806666.1

    UniProtKB/TrEMBL
    A0A2R9A101
    Conserved Domains (2) summary
    smart00413
    Location:367 → 452
    ETS; erythroblast transformation specific domain
    pfam04621
    Location:1 → 366
    ETS_PEA3_N; PEA3 subfamily ETS-domain transcription factor N terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.