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CREB1 cAMP responsive element binding protein 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100913327, updated on 8-Mar-2024

Summary

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Gene symbol
CREB1
Gene description
cAMP responsive element binding protein 1
See related
Ensembl:ENSSHAG00000013905
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See CREB1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 3 NC_045428.1 (75401824..75487285, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 3 Unlocalized Scaffold NW_003831909.1 (1339101..1427187, complement)

Chromosome 3 - NC_045428.1Genomic Context describing neighboring genes Neighboring gene cyclin Y like 1 Neighboring gene methyltransferase 21A, HSPA lysine Neighboring gene uncharacterized LOC116422237 Neighboring gene KLF transcription factor 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cAMP response element binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ATF4-CREB1 transcription factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic AMP-responsive element-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045428.1 Reference mSarHar1.11 Primary Assembly

    Range
    75401824..75487285 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031958202.1 → XP_031814062.1  cyclic AMP-responsive element-binding protein 1 isoform X2

    Conserved Domains (2) summary
    cd14690
    Location:231 → 285
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:59 → 97
    pKID; pKID domain

  2. XM_003765979.4 → XP_003766027.1  cyclic AMP-responsive element-binding protein 1 isoform X1

    See identical proteins and their annotated locations for XP_003766027.1

    UniProtKB/TrEMBL
    A0A7N4UYD2, G3WLN6
    Related
    ENSSHAP00000025650.1, ENSSHAT00000036634.1
    Conserved Domains (2) summary
    cd14690
    Location:271 → 325
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:99 → 137
    pKID; pKID domain

  3. XM_012546433.3 → XP_012401887.1  cyclic AMP-responsive element-binding protein 1 isoform X4

    See identical proteins and their annotated locations for XP_012401887.1

    Conserved Domains (1) summary
    cd14690
    Location:55 → 109
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain

  4. XM_023500651.2 → XP_023356419.1  cyclic AMP-responsive element-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A7N4P5B5
    Related
    ENSSHAP00000031863.1, ENSSHAT00000030022.1
    Conserved Domains (1) summary
    pfam02173
    Location:99 → 137
    pKID; pKID domain
Nucleotide Protein
Heading Accession and Version

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