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LOC100904962 transcription factor egl-13 [ Galendromus occidentalis (western predatory mite) ]

Gene ID: 100904962, updated on 1-Aug-2024

Summary

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Gene symbol
LOC100904962
Gene description
transcription factor egl-13
See related
EnsemblRapid:LOC100904962
Gene type
protein coding
RefSeq status
MODEL
Organism
Galendromus occidentalis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Mesostigmata; Gamasina; Phytoseioidea; Phytoseiidae; Typhlodrominae; Galendromus
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Genomic context

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See LOC100904962 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Mocc_1.0 (GCF_000255335.1) Unplaced Scaffold NW_003805476.1 (1184327..1185022, complement)

NW_003805476.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100904673 Neighboring gene transcription factor Sox-5 Neighboring gene uncharacterized LOC100901316 Neighboring gene mini-chromosome maintenance complex-binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003805476 Unplaced Scaffold Reference Mocc_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor egl-13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Galendromus occidentalis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mocc_1.0 Primary Assembly

Genomic

  1. NW_003805476.1 Reference Mocc_1.0 Primary Assembly

    Range
    1184327..1185022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029112260.1 → XP_028968093.1  transcription factor egl-13

    UniProtKB/TrEMBL
    A0AAJ7SG26
    Related
    XP_028968093.1, XM_029112260.1
    Conserved Domains (1) summary
    cd01388
    Location:1 → 67
    SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases