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tj traffic jam [ Megachile rotundata (alfalfa leafcutting bee) ]

Gene ID: 100877315, updated on 10-Oct-2024

Summary

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Gene symbol
tj
Gene description
traffic jam
See related
EnsemblRapid:LOC100877315
Gene type
protein coding
RefSeq status
MODEL
Organism
Megachile rotundata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Megachilidae; Megachilinae; Megachile
Orthologs
fruit fly honey bee all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current MROT_1.0 (GCF_000220905.1) Unplaced Scaffold NW_003797128.1 (1452586..1513318)

NW_003797128.1Genomic Context describing neighboring genes Neighboring gene lethal (2) giant discs 1 Neighboring gene ethanolamine kinase 1 Neighboring gene pickpocket protein 11-like Neighboring gene Caspase-8 Dredd

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003797128.1 Unplaced Scaffold Reference MROT_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor Maf

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megachile rotundata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MROT_1.0

Genomic

  1. NW_003797128.1 Reference MROT_1.0

    Range
    1452586..1513318
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012281726.1 → XP_012137116.1  transcription factor Maf

    See identical proteins and their annotated locations for XP_012137116.1

    Related
    XP_012137116.1, XM_012281726.1
    Conserved Domains (1) summary
    cd14718
    Location:313 → 382
    bZIP_Maf_large; Basic leucine zipper (bZIP) domain of large musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain

  2. XM_012281728.1 → XP_012137118.1  transcription factor Maf

    See identical proteins and their annotated locations for XP_012137118.1

    Related
    XP_012137118.1, XM_012281728.1
    Conserved Domains (1) summary
    cd14718
    Location:313 → 382
    bZIP_Maf_large; Basic leucine zipper (bZIP) domain of large musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain

  3. XM_012281727.1 → XP_012137117.1  transcription factor Maf

    See identical proteins and their annotated locations for XP_012137117.1

    Related
    XP_012137117.1, XM_012281727.1
    Conserved Domains (1) summary
    cd14718
    Location:313 → 382
    bZIP_Maf_large; Basic leucine zipper (bZIP) domain of large musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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