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LOC100874666 zinc finger protein 385B-like [ Megachile rotundata (alfalfa leafcutting bee) ]

Gene ID: 100874666, updated on 1-Oct-2024

Summary

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Gene symbol
LOC100874666
Gene description
zinc finger protein 385B-like
See related
EnsemblRapid:LOC100874666
Gene type
protein coding
RefSeq status
MODEL
Organism
Megachile rotundata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Megachilidae; Megachilinae; Megachile
Orthologs
honey bee all
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Genomic context

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See LOC100874666 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current MROT_1.0 (GCF_000220905.1) Unplaced Scaffold NW_003797186.1 (596982..604675, complement)

NW_003797186.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100883848 Neighboring gene protein split ends-like Neighboring gene frizzled Neighboring gene msx2-interacting protein-like Neighboring gene dynein regulatory complex protein 1 Neighboring gene zinc finger protein 39-like Neighboring gene Actin-related protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003797186.1 Unplaced Scaffold Reference MROT_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genes involved in convergent evolution of eusociality in bees. Woodard SH, et al. Proc Natl Acad Sci U S A, 2011 May 3. PMID 21482769, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 385B-like; zinc finger protein 385D-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megachile rotundata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MROT_1.0

Genomic

  1. NW_003797186.1 Reference MROT_1.0

    Range
    596982..604675 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012286998.1 → XP_012142388.1  zinc finger protein 385D-like isoform X5

    Related
    XP_012142388.1, XM_012286998.1
    Conserved Domains (2) summary
    sd00020
    Location:138 → 160
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:191 → 213
    zf-met; Zinc-finger of C2H2 type

  2. XM_012286997.1 → XP_012142387.1  zinc finger protein 385B-like isoform X4

    Related
    XP_012142387.1, XM_012286997.1
    Conserved Domains (2) summary
    sd00020
    Location:138 → 160
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:191 → 213
    zf-met; Zinc-finger of C2H2 type

  3. XM_012286995.1 → XP_012142385.1  zinc finger protein 385B-like isoform X2

    Related
    XP_012142385.1, XM_012286995.1
    Conserved Domains (2) summary
    sd00020
    Location:138 → 160
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:191 → 213
    zf-met; Zinc-finger of C2H2 type

  4. XM_012286996.1 → XP_012142386.1  zinc finger protein 385B-like isoform X3

    Related
    XP_012142386.1, XM_012286996.1
    Conserved Domains (2) summary
    sd00020
    Location:138 → 160
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:191 → 213
    zf-met; Zinc-finger of C2H2 type

  5. XM_012286994.1 → XP_012142384.1  zinc finger protein 385B-like isoform X1

    Related
    XP_012142384.1, XM_012286994.1
    Conserved Domains (2) summary
    sd00020
    Location:191 → 213
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:251 → 273
    zf-met; Zinc-finger of C2H2 type

  6. XM_012286999.1 → XP_012142389.1  zinc finger protein 385D-like isoform X6

    Related
    XP_012142389.1, XM_012286999.1
    Conserved Domains (2) summary
    sd00020
    Location:138 → 160
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:191 → 213
    zf-met; Zinc-finger of C2H2 type

RNA

  1. XR_001096209.1 RNA Sequence

    Related
    XR_001096209.1
Nucleotide Protein
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