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Gcm2 glial cells missing transcription factor 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100761954, updated on 8-Mar-2024

Summary

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Gene symbol
Gcm2
Gene description
glial cells missing transcription factor 2
Locus tag
I79_013928
See related
Ensembl:ENSCGRG00015001233
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Gcm2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614251.1 (801430..806964)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (260739336..260744855, complement)

NW_003614251.1Genomic Context describing neighboring genes Neighboring gene ELOVL fatty acid elongase 2 Neighboring gene synaptonemal complex protein 2 like Neighboring gene U6 spliceosomal RNA Neighboring gene male germ cell associated kinase Neighboring gene transmembrane protein 14C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gliogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chorion-specific transcription factor GCMb
Names
Chorion-specific transcription factor GCMb
glial cells missing homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614251.1 Reference CriGri_1.0 Primary Assembly

    Range
    801430..806964
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003506515.1 → XP_003506563.1  chorion-specific transcription factor GCMb

    UniProtKB/TrEMBL
    A0A8C2LEZ1, A0A9J7FTV3
    Conserved Domains (1) summary
    pfam03615
    Location:35 → 172
    GCM; GCM motif protein

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    260739336..260744855 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027410460.1 → XP_027266261.1  chorion-specific transcription factor GCMb

    UniProtKB/TrEMBL
    A0A8C2LEZ1, A0A9J7FTV3
    Related
    ENSCGRP00015001474.1, ENSCGRT00015001859.2
Nucleotide Protein Strain
Heading Accession and Version

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