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LOC100748675 homeobox protein ARX-like [ Bombus impatiens (common eastern bumble bee) ]

Gene ID: 100748675, updated on 1-Oct-2024

Summary

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Gene symbol
LOC100748675
Gene description
homeobox protein ARX-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus impatiens
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus
Orthologs
honey bee all
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Genomic context

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See LOC100748675 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
103 current BIMP_2.2 (GCF_000188095.3) Unplaced Scaffold NT_176446.1 (1526165..1528086, complement)

NT_176446.1Genomic Context describing neighboring genes Neighboring gene facilitated trehalose transporter Tret1 Neighboring gene uncharacterized LOC100748317 Neighboring gene proteasome subunit beta type-3 Neighboring gene cullin 2 Neighboring gene uncharacterized LOC112212940 Neighboring gene Prenyl-binding protein Neighboring gene uncharacterized LOC112212967

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_176446 Unplaced Scaffold Reference BIMP_2.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein ARX-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus impatiens Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BIMP_2.2

Genomic

  1. NT_176446.1 Reference BIMP_2.2

    Range
    1526165..1528086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003484908.4 → XP_003484956.1  homeobox protein ARX-like

    See identical proteins and their annotated locations for XP_003484956.1

    UniProtKB/TrEMBL
    A0A6P3DPF5
    Conserved Domains (1) summary
    pfam00046
    Location:98 → 151
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases