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LOC100747688 DNA-binding protein D-ETS-6-like [ Bombus impatiens (common eastern bumble bee) ]

Gene ID: 100747688, updated on 2-Oct-2024

Summary

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Gene symbol
LOC100747688
Gene description
DNA-binding protein D-ETS-6-like
See related
EnsemblRapid:ENSBIMG00000001497
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus impatiens
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus
Orthologs
honey bee all
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Genomic context

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See LOC100747688 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
103 current BIMP_2.2 (GCF_000188095.3) Unplaced Scaffold NT_176837.1 (2644921..2653568, complement)

NT_176837.1Genomic Context describing neighboring genes Neighboring gene poly(U)-specific endoribonuclease homolog Neighboring gene zinc finger MYND-type containing 10 Neighboring gene ribosomal protein S12 Neighboring gene male-enhanced antigen 1 Neighboring gene GABA neurotransmitter transporter-1B

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_176837 Unplaced Scaffold Reference BIMP_2.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein D-ETS-6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus impatiens Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BIMP_2.2

Genomic

  1. NT_176837.1 Reference BIMP_2.2

    Range
    2644921..2653568 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003490326.3 → XP_003490374.1  DNA-binding protein D-ETS-6-like

    UniProtKB/TrEMBL
    A0A6P3DZG5
    Related
    ENSBIMP00000000220.1, ENSBIMT00000007623.1
    Conserved Domains (2) summary
    cd08203
    Location:51 → 114
    SAM_PNT; Sterile alpha motif (SAM)/Pointed domain
    smart00413
    Location:163 → 246
    ETS; erythroblast transformation specific domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases