U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

hbn homeobrain [ Bombus impatiens (common eastern bumble bee) ]

Gene ID: 100741215, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
hbn
Gene description
homeobrain
See related
EnsemblRapid:ENSBIMG00000013967
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus impatiens
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus
Orthologs
fruit fly honey bee all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See hbn in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current BIMP_2.2 (GCF_000188095.3) Unplaced Scaffold NT_176590.1 (162904..175362)

NT_176590.1Genomic Context describing neighboring genes Neighboring gene tipE homolog 1 Neighboring gene uncharacterized LOC117151381 Neighboring gene retinal homeobox protein Rx1-like Neighboring gene kynurenine/alpha-aminoadipate aminotransferase, mitochondrial-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NT_176590 Unplaced Scaffold Reference BIMP_2.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
paired box protein Pax-6-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bombus impatiens Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BIMP_2.2

Genomic

  1. NT_176590.1 Reference BIMP_2.2

    Range
    162904..175362
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033319583.1 → XP_033175474.1  paired box protein Pax-6-like

    UniProtKB/TrEMBL
    A0A6P8LKC4
    Related
    ENSBIMP00000020539.1, ENSBIMT00000032976.1
    Conserved Domains (1) summary
    pfam00046
    Location:79 → 133
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases