U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

C15 homeobox protein C15 [ Bombus impatiens (common eastern bumble bee) ]

Gene ID: 100740155, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
C15
Gene description
homeobox protein C15
See related
EnsemblRapid:ENSBIMG00000017538
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus impatiens
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus
Orthologs
fruit fly honey bee all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See C15 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current BIMP_2.2 (GCF_000188095.3) Unplaced Scaffold NT_177864.1 (874237..885433, complement)

NT_177864.1Genomic Context describing neighboring genes Neighboring gene mitochondrial fission regulator 2-like Neighboring gene corazonin Neighboring gene dephosphocoenzyme A carrier Neighboring gene mitotic checkpoint protein Bub3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NT_177864 Unplaced Scaffold Reference BIMP_2.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in animal organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
T-cell leukemia homeobox protein 2-like; T-cell leukemia homeobox protein 3-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bombus impatiens Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BIMP_2.2

Genomic

  1. NT_177864.1 Reference BIMP_2.2

    Range
    874237..885433 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033324009.1 → XP_033179900.1  T-cell leukemia homeobox protein 2-like isoform X2

    UniProtKB/TrEMBL
    A0A6P8M3H9
    Conserved Domains (1) summary
    cl00084
    Location:1 → 19
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  2. XM_024371546.2 → XP_024227314.1  T-cell leukemia homeobox protein 3-like isoform X1

    UniProtKB/TrEMBL
    A0A6P6FIM5
    Conserved Domains (1) summary
    pfam00046
    Location:66 → 120
    Homeobox; Homeobox domain

  3. XM_033324010.1 → XP_033179901.1  T-cell leukemia homeobox protein 2-like isoform X2

    UniProtKB/TrEMBL
    A0A6P8M3H9
    Related
    ENSBIMP00000028673.1, ENSBIMT00000004345.1
    Conserved Domains (1) summary
    cl00084
    Location:1 → 19
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

RNA

  1. XR_001102719.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases