foxp2 forkhead box P2 [Oreochromis niloticus (Nile tilapia)] - Gene

Summary

Gene symbol: foxp2
Gene description: forkhead box P2
See related: Ensembl:ENSONIG00000016789
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Oreochromis niloticus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression: Biased expression in testis (RPKM 4.0), whole embryo (RPKM 4.0) and 5 other tissues See more
Orthologs: human zebrafish all
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Genomic context

Location:: chromosome: LG17

Exon count:: 16

Annotation release	Status	Assembly	LG	Location
104	current	O_niloticus_UMD_NMBU (GCF_001858045.2)	LG17	NC_031981.2 (7679303..7735612)
103	previous assembly	ASM185804v2 (GCF_001858045.1)	LG17	NC_031981.1 (7689202..7745511)

Linkage Group LG17 - NC_031981.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Oreochromis niloticus Transcriptome or Gene expression Oreochromis niloticus Transcriptome or Gene expression
Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
BioProject: PRJNA78915
Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: forkhead box protein P2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001311335.1 → NP_001298264.1 forkhead box protein P2

Status: PROVISIONAL

Source sequence(s)

BK008617

UniProtKB/TrEMBL

I3KJ61, V6F808

Related

ENSONIP00000021156.2, ENSONIT00000021175.2

Conserved Domains (2) summary

cd00059
Location:506 → 578

FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...

pfam16159
Location:332 → 399

FOXP-CC; FOXP coiled-coil domain